Gene annotation
Transcriptome id Sobic.008G145800.3,Sobic.008G145800.1,Sobic.008G145800.2,Sobic.008G145800.4
Synonym PDE135, Sb08g019580
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt A0A1B6PDX5
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G26510 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os12g39420.3,LOC_Os12g39420.10,LOC_Os12g39420.2 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a004424
Brachypodium KQJ86121 , KQJ86120
Barley HORVU5Hr1G018400.2 , HORVU5Hr1G018400.3 , HORVU5Hr1G018400.1 , HORVU5Hr1G018400.6 , HORVU5Hr1G018400.7 , HORVU5Hr1G018400.4 , HORVU5Hr1G018400.5 , HORVU5Hr1G018400.8 , HORVU5Hr1G018400.10 , HORVU5Hr1G018400.11 , HORVU5Hr1G018400.12 , HORVU5Hr1G018400.13 , HORVU5Hr1G018400.14 , HORVU5Hr1G018400.15 , HORVU5Hr1G018400.17 , HORVU5Hr1G018400.18 , HORVU5Hr1G018400.19 , HORVU5Hr1G018400.22 , HORVU5Hr1G018400.24 , HORVU5Hr1G018400.21 , HORVU5Hr1G018400.20
Wheat TraesCS5A02G070500 , TraesCS5B02G076300 , TraesCS5B02G076300 , TraesCS5D02G082400
Populus -


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cDNA sequences
Sobic.008G145800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G456900 expressed protein -
2 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
3 Sobic.004G088200 transcription factor S-II, central domain containing protein, expressed -
4 Sobic.006G056700 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
5 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
6 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
7 Sobic.008G088200 DnaK family protein, putative, expressed -
8 Sobic.004G129300 chromatin modification-related protein EAF3, putative, expressed K11339: MORF4L1, MRG15, mortality factor 4-like protein 1
9 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
10 Sobic.010G089400 TLD family protein, putative, expressed -
11 Sobic.006G096900 expressed protein -
12 Sobic.001G501800 ZOS1-20 - C2H2 zinc finger protein, expressed -
13 Sobic.002G257750 - -
14 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
15 Sobic.003G217900 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G202000 double-stranded RNA binding motif containing protein, expressed -
17 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
18 Sobic.006G019300 F-box-like/WD repeat-containing protein TBL1XR1-A, putative, expressed K04508: transducin (beta)-like 1
19 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.002G029100 GYF domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G145800 Sobic008G145800 Sobic001G456900 Sobic001G456900 Sobic008G145800--Sobic001G456900 Sobic007G159900 Sobic007G159900 Sobic008G145800--Sobic007G159900 Sobic004G088200 Sobic004G088200 Sobic008G145800--Sobic004G088200 Sobic006G056700 Sobic006G056700 Sobic008G145800--Sobic006G056700 Sobic004G311400 Sobic004G311400 Sobic008G145800--Sobic004G311400 Sobic005G100700 Sobic005G100700 Sobic008G145800--Sobic005G100700 Sobic008G088200 Sobic008G088200 Sobic008G145800--Sobic008G088200 Sobic004G129300 Sobic004G129300 Sobic008G145800--Sobic004G129300 Sobic010G237900 Sobic010G237900 Sobic008G145800--Sobic010G237900 Sobic001G036050 Sobic001G036050 Sobic001G456900--Sobic001G036050 Sobic010G139000 Sobic010G139000 Sobic001G456900--Sobic010G139000 Sobic004G258700 Sobic004G258700 Sobic001G456900--Sobic004G258700 Sobic008G113100 Sobic008G113100 Sobic001G456900--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic001G456900--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic001G456900--Sobic002G180666 Sobic001G311500 Sobic001G311500 Sobic001G456900--Sobic001G311500 Sobic003G398700 Sobic003G398700 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic003G360400 Sobic003G360400 Sobic007G159900--Sobic003G360400 Sobic004G158400 Sobic004G158400 Sobic007G159900--Sobic004G158400 Sobic002G366400 Sobic002G366400 Sobic007G159900--Sobic002G366400 Sobic010G112100 Sobic010G112100 Sobic007G159900--Sobic010G112100 Sobic007G183900 Sobic007G183900 Sobic007G159900--Sobic007G183900 Sobic005G064000 Sobic005G064000 Sobic007G159900--Sobic005G064000 Sobic007G159900--Sobic005G100700 Sobic003G188400 Sobic003G188400 Sobic007G159900--Sobic003G188400 Sobic007G159900--Sobic008G113100 Sobic003G394300 Sobic003G394300 Sobic004G088200--Sobic003G394300 Sobic010G167900 Sobic010G167900 Sobic004G088200--Sobic010G167900 Sobic005G207500 Sobic005G207500 Sobic004G088200--Sobic005G207500 Sobic006G096900 Sobic006G096900 Sobic004G088200--Sobic006G096900 Sobic002G153700 Sobic002G153700 Sobic004G088200--Sobic002G153700 Sobic007G212300 Sobic007G212300 Sobic004G088200--Sobic007G212300 Sobic004G088200--Sobic001G311500 Sobic003G307000 Sobic003G307000 Sobic004G088200--Sobic003G307000 Sobic005G008800 Sobic005G008800 Sobic004G088200--Sobic005G008800 Sobic006G056700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic006G056700--Sobic001G456300 Sobic006G056700--Sobic010G237900 Sobic001G275300 Sobic001G275300 Sobic006G056700--Sobic001G275300 Sobic008G063300 Sobic008G063300 Sobic006G056700--Sobic008G063300 Sobic002G170200 Sobic002G170200 Sobic006G056700--Sobic002G170200 Sobic004G131800 Sobic004G131800 Sobic006G056700--Sobic004G131800 Sobic006G056700--Sobic007G159900 Sobic006G056700--Sobic003G360400 Sobic002G029100 Sobic002G029100 Sobic004G311400--Sobic002G029100 Sobic008G096000 Sobic008G096000 Sobic004G311400--Sobic008G096000 Sobic003G038100 Sobic003G038100 Sobic004G311400--Sobic003G038100 Sobic005G200800 Sobic005G200800 Sobic004G311400--Sobic005G200800 Sobic004G311400--Sobic005G207500 Sobic004G311400--Sobic002G153700 Sobic002G245000 Sobic002G245000 Sobic004G311400--Sobic002G245000 Sobic003G214600 Sobic003G214600 Sobic004G311400--Sobic003G214600 Sobic010G089400 Sobic010G089400 Sobic004G311400--Sobic010G089400 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic005G100700--Sobic006G096900 Sobic005G100700--Sobic001G456300 Sobic005G100700--Sobic010G112100 Sobic001G208700 Sobic001G208700 Sobic008G088200--Sobic001G208700 Sobic008G088200--Sobic008G145800 Sobic008G088200--Sobic003G038100 Sobic008G088200--Sobic004G311400 Sobic008G088200--Sobic008G096000 Sobic006G200500 Sobic006G200500 Sobic008G088200--Sobic006G200500 Sobic003G159500 Sobic003G159500 Sobic008G088200--Sobic003G159500 Sobic008G088200--Sobic002G029100 Sobic004G285400 Sobic004G285400 Sobic008G088200--Sobic004G285400 Sobic004G129300--Sobic010G237900 Sobic007G191700 Sobic007G191700 Sobic004G129300--Sobic007G191700 Sobic001G002600 Sobic001G002600 Sobic004G129300--Sobic001G002600 Sobic007G091600 Sobic007G091600 Sobic004G129300--Sobic007G091600 Sobic007G090430 Sobic007G090430 Sobic004G129300--Sobic007G090430 Sobic008G173100 Sobic008G173100 Sobic004G129300--Sobic008G173100 Sobic001G087600 Sobic001G087600 Sobic004G129300--Sobic001G087600 Sobic007G183300 Sobic007G183300 Sobic004G129300--Sobic007G183300 Sobic001G384300 Sobic001G384300 Sobic004G129300--Sobic001G384300 Sobic010G237900--Sobic004G129300 Sobic010G237900--Sobic007G191700 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G145800 Sobic010G145800 Sobic010G237900--Sobic010G145800
Octagon: transcription factors


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