Gene annotation
Transcriptome id Sobic.003G375600.1
Synonym
Functional annotation -
UniProt A0A1B6Q7B3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
2 Sobic.004G083300 OsFBL7 - F-box domain and LRR containing protein, expressed K14515: EIN3-binding F-box protein
3 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
4 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
5 Sobic.004G219300 GLTP domain containing protein, putative, expressed -
6 Sobic.007G152400 eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
7 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
9 Sobic.005G033200 expressed protein -
10 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
11 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
12 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
13 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
14 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
15 Sobic.009G203100 expressed protein -
16 Sobic.009G015700 actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
18 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
19 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
20 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)


Gene co-expression network
sample Sobic003G375600 Sobic003G375600 Sobic009G174900 Sobic009G174900 Sobic003G375600--Sobic009G174900 Sobic004G083300 Sobic004G083300 Sobic003G375600--Sobic004G083300 Sobic003G265400 Sobic003G265400 Sobic003G375600--Sobic003G265400 Sobic010G267500 Sobic010G267500 Sobic003G375600--Sobic010G267500 Sobic004G219300 Sobic004G219300 Sobic003G375600--Sobic004G219300 Sobic007G152400 Sobic007G152400 Sobic003G375600--Sobic007G152400 Sobic001G433400 Sobic001G433400 Sobic003G375600--Sobic001G433400 Sobic003G337000 Sobic003G337000 Sobic003G375600--Sobic003G337000 Sobic005G033200 Sobic005G033200 Sobic003G375600--Sobic005G033200 Sobic009G174900--Sobic003G337000 Sobic002G400000 Sobic002G400000 Sobic009G174900--Sobic002G400000 Sobic004G327300 Sobic004G327300 Sobic009G174900--Sobic004G327300 Sobic009G135600 Sobic009G135600 Sobic009G174900--Sobic009G135600 Sobic007G168600 Sobic007G168600 Sobic009G174900--Sobic007G168600 Sobic006G212100 Sobic006G212100 Sobic009G174900--Sobic006G212100 Sobic001G491100 Sobic001G491100 Sobic009G174900--Sobic001G491100 Sobic002G134001 Sobic002G134001 Sobic009G174900--Sobic002G134001 Sobic001G054200 Sobic001G054200 Sobic009G174900--Sobic001G054200 Sobic010G135000 Sobic010G135000 Sobic004G083300--Sobic010G135000 Sobic004G083300--Sobic002G134001 Sobic004G083300--Sobic004G327300 Sobic009G131100 Sobic009G131100 Sobic004G083300--Sobic009G131100 Sobic004G083300--Sobic006G212100 Sobic004G083300--Sobic009G174900 Sobic001G463100 Sobic001G463100 Sobic004G083300--Sobic001G463100 Sobic006G180200 Sobic006G180200 Sobic004G083300--Sobic006G180200 Sobic001G415500 Sobic001G415500 Sobic004G083300--Sobic001G415500 Sobic004G217600 Sobic004G217600 Sobic003G265400--Sobic004G217600 Sobic003G369500 Sobic003G369500 Sobic003G265400--Sobic003G369500 Sobic003G265400--Sobic009G131100 Sobic001G193200 Sobic001G193200 Sobic003G265400--Sobic001G193200 Sobic005G168700 Sobic005G168700 Sobic003G265400--Sobic005G168700 Sobic001G131400 Sobic001G131400 Sobic003G265400--Sobic001G131400 Sobic006G281200 Sobic006G281200 Sobic003G265400--Sobic006G281200 Sobic003G291400 Sobic003G291400 Sobic003G265400--Sobic003G291400 Sobic006G206700 Sobic006G206700 Sobic003G265400--Sobic006G206700 Sobic006G207500 Sobic006G207500 Sobic010G267500--Sobic006G207500 Sobic004G060600 Sobic004G060600 Sobic010G267500--Sobic004G060600 Sobic007G097900 Sobic007G097900 Sobic010G267500--Sobic007G097900 Sobic010G267500--Sobic003G369500 Sobic003G402600 Sobic003G402600 Sobic010G267500--Sobic003G402600 Sobic007G226100 Sobic007G226100 Sobic010G267500--Sobic007G226100 Sobic003G361500 Sobic003G361500 Sobic010G267500--Sobic003G361500 Sobic004G001400 Sobic004G001400 Sobic010G267500--Sobic004G001400 Sobic008G137600 Sobic008G137600 Sobic010G267500--Sobic008G137600 Sobic001G459200 Sobic001G459200 Sobic004G219300--Sobic001G459200 Sobic003G130800 Sobic003G130800 Sobic004G219300--Sobic003G130800 Sobic004G330700 Sobic004G330700 Sobic004G219300--Sobic004G330700 Sobic004G219300--Sobic010G135000 Sobic004G055200 Sobic004G055200 Sobic004G219300--Sobic004G055200 Sobic009G185800 Sobic009G185800 Sobic004G219300--Sobic009G185800 Sobic008G033600 Sobic008G033600 Sobic004G219300--Sobic008G033600 Sobic010G232100 Sobic010G232100 Sobic004G219300--Sobic010G232100 Sobic004G219300--Sobic006G180200 Sobic005G111100 Sobic005G111100 Sobic007G152400--Sobic005G111100 Sobic007G091000 Sobic007G091000 Sobic007G152400--Sobic007G091000 Sobic002G428200 Sobic002G428200 Sobic007G152400--Sobic002G428200 Sobic002G257400 Sobic002G257400 Sobic007G152400--Sobic002G257400 Sobic001G128400 Sobic001G128400 Sobic007G152400--Sobic001G128400 Sobic001G481700 Sobic001G481700 Sobic007G152400--Sobic001G481700 Sobic007G152400--Sobic008G137600 Sobic004G204800 Sobic004G204800 Sobic007G152400--Sobic004G204800 Sobic002G331300 Sobic002G331300 Sobic007G152400--Sobic002G331300 Sobic002G045300 Sobic002G045300 Sobic001G433400--Sobic002G045300 Sobic001G433400--Sobic002G400000 Sobic003G367451 Sobic003G367451 Sobic001G433400--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic001G433400--Sobic009G146100 Sobic001G433400--Sobic009G135600 Sobic003G253000 Sobic003G253000 Sobic001G433400--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic001G433400--Sobic003G220600 Sobic001G433400--Sobic004G327300 Sobic007G186300 Sobic007G186300 Sobic001G433400--Sobic007G186300 Sobic003G337000--Sobic009G174900 Sobic003G337000--Sobic001G415500 Sobic003G337000--Sobic001G054200 Sobic006G232200 Sobic006G232200 Sobic003G337000--Sobic006G232200 Sobic008G161800 Sobic008G161800 Sobic003G337000--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic003G337000--Sobic004G248800 Sobic003G337000--Sobic003G253000 Sobic003G337000--Sobic009G185800 Sobic003G337000--Sobic009G135600 Sobic003G264200 Sobic003G264200 Sobic005G033200--Sobic003G264200 Sobic001G314500 Sobic001G314500 Sobic005G033200--Sobic001G314500 Sobic001G428100 Sobic001G428100 Sobic005G033200--Sobic001G428100 Sobic004G130100 Sobic004G130100 Sobic005G033200--Sobic004G130100 Sobic005G111900 Sobic005G111900 Sobic005G033200--Sobic005G111900 Sobic003G349300 Sobic003G349300 Sobic005G033200--Sobic003G349300 Sobic009G217900 Sobic009G217900 Sobic005G033200--Sobic009G217900 Sobic003G440800 Sobic003G440800 Sobic005G033200--Sobic003G440800 Sobic006G049700 Sobic006G049700 Sobic005G033200--Sobic006G049700
Octagon: transcription factors


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