Gene annotation
Transcriptome id Sobic.009G203100.1
Synonym Sb09g026050
Functional annotation expressed protein
UniProt C5Z1C9
Pfam -
Panther DB PTHR36744
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G43780 : -
RAP-DB (Rice) LOC_Os12g41760.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G203100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459200 MYB family transcription factor, putative, expressed -
2 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
3 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
4 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
5 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
6 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
7 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
8 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
9 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
10 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
11 Sobic.004G049900 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
12 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
13 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
14 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
15 Sobic.010G225300 ubiquitin family protein, putative, expressed K08770: ubiquitin C
16 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
17 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
18 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
19 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.010G042100 transcription elongation factor 1, putative, expressed -


Gene co-expression network
sample Sobic009G203100 Sobic009G203100 Sobic001G459200 Sobic001G459200 Sobic009G203100--Sobic001G459200 Sobic002G204100 Sobic002G204100 Sobic009G203100--Sobic002G204100 Sobic009G185800 Sobic009G185800 Sobic009G203100--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic009G203100--Sobic003G253000 Sobic004G055200 Sobic004G055200 Sobic009G203100--Sobic004G055200 Sobic001G040800 Sobic001G040800 Sobic009G203100--Sobic001G040800 Sobic004G330700 Sobic004G330700 Sobic009G203100--Sobic004G330700 Sobic005G034400 Sobic005G034400 Sobic009G203100--Sobic005G034400 Sobic002G045300 Sobic002G045300 Sobic009G203100--Sobic002G045300 Sobic001G459200--Sobic009G185800 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic002G046100 Sobic002G046100 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic003G130800 Sobic003G130800 Sobic001G459200--Sobic003G130800 Sobic002G204100--Sobic009G203100 Sobic002G204100--Sobic003G253000 Sobic002G204100--Sobic001G459200 Sobic002G204100--Sobic009G185800 Sobic002G204100--Sobic005G034400 Sobic004G049900 Sobic004G049900 Sobic002G204100--Sobic004G049900 Sobic002G204100--Sobic004G055200 Sobic008G189300 Sobic008G189300 Sobic002G204100--Sobic008G189300 Sobic002G187500 Sobic002G187500 Sobic002G204100--Sobic002G187500 Sobic009G185800--Sobic001G459200 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic003G350300 Sobic003G350300 Sobic009G185800--Sobic003G350300 Sobic009G185800--Sobic004G330700 Sobic009G185800--Sobic004G272800 Sobic009G185800--Sobic003G181500 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic002G345300 Sobic002G345300 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic003G253000--Sobic006G108400 Sobic008G033600 Sobic008G033600 Sobic004G055200--Sobic008G033600 Sobic004G055200--Sobic001G459200 Sobic004G055200--Sobic003G130800 Sobic004G055200--Sobic004G330700 Sobic001G281400 Sobic001G281400 Sobic004G055200--Sobic001G281400 Sobic004G187900 Sobic004G187900 Sobic004G055200--Sobic004G187900 Sobic004G055200--Sobic001G499300 Sobic001G477300 Sobic001G477300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic002G194100 Sobic002G194100 Sobic001G040800--Sobic002G194100 Sobic001G040800--Sobic003G253000 Sobic009G001400 Sobic009G001400 Sobic001G040800--Sobic009G001400 Sobic002G363100 Sobic002G363100 Sobic001G040800--Sobic002G363100 Sobic002G202300 Sobic002G202300 Sobic001G040800--Sobic002G202300 Sobic001G040800--Sobic003G130800 Sobic002G355300 Sobic002G355300 Sobic001G040800--Sobic002G355300 Sobic007G114200 Sobic007G114200 Sobic001G040800--Sobic007G114200 Sobic007G088000 Sobic007G088000 Sobic001G040800--Sobic007G088000 Sobic004G330700--Sobic004G055200 Sobic004G330700--Sobic001G459200 Sobic004G330700--Sobic009G185800 Sobic001G393500 Sobic001G393500 Sobic004G330700--Sobic001G393500 Sobic004G330700--Sobic003G130800 Sobic004G330700--Sobic001G499300 Sobic004G330700--Sobic003G181500 Sobic010G135000 Sobic010G135000 Sobic004G330700--Sobic010G135000 Sobic003G136000 Sobic003G136000 Sobic004G330700--Sobic003G136000 Sobic005G034400--Sobic008G033600 Sobic005G034400--Sobic004G055200 Sobic005G034400--Sobic001G459200 Sobic004G020000 Sobic004G020000 Sobic005G034400--Sobic004G020000 Sobic005G034400--Sobic003G253000 Sobic002G264400 Sobic002G264400 Sobic005G034400--Sobic002G264400 Sobic001G224400 Sobic001G224400 Sobic005G034400--Sobic001G224400 Sobic005G034400--Sobic002G267500 Sobic001G288800 Sobic001G288800 Sobic005G034400--Sobic001G288800 Sobic001G433400 Sobic001G433400 Sobic002G045300--Sobic001G433400 Sobic010G042100 Sobic010G042100 Sobic002G045300--Sobic010G042100 Sobic002G045300--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic002G045300--Sobic003G220600 Sobic002G045300--Sobic004G049900 Sobic003G367451 Sobic003G367451 Sobic002G045300--Sobic003G367451 Sobic002G045300--Sobic003G130800 Sobic009G135600 Sobic009G135600 Sobic002G045300--Sobic009G135600 Sobic010G101500 Sobic010G101500 Sobic002G045300--Sobic010G101500
Octagon: transcription factors


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