Gene annotation
Transcriptome id Sobic.009G114500.2,Sobic.009G114500.1
Synonym TPK1, Sb09g018200
Functional annotation thiamin pyrophosphokinase 1, putative, expressed
UniProt C5YWW8 , A0A1Z5R3B6
Pfam PF04265 PF04263
Panther DB PTHR13622 PTHR13622:SF7
NCBI CDD KOG3153; Thiamine pyrophosphokinase
KEGG Orthology K00949; thiN, TPK1, thiamine pyrophosphokinase
Gene Ontology GO:0009229; thiamine diphosphate biosynthetic process GO:0005524ATP binding GO:0004788thiamine diphosphokinase activity


Orthologs (automatic annotation)
TAIR AT1G02880 : thiamin pyrophosphokinase1
RAP-DB (Rice) LOC_Os05g30454.1,LOC_Os01g70580.1 : thiamin pyrophosphokinase 1, putative, expressed
MaizeGDB (Corn) Zm00025a026165
Brachypodium -
Barley HORVU3Hr1G097210.1 , HORVU3Hr1G097210.2 , HORVU3Hr1G097210.3 , HORVU3Hr1G097210.4 , HORVU3Hr1G097210.6
Wheat TraesCS3B02G485900 , TraesCS3A02G449200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G151400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.001G131400 thioesterase family protein, putative, expressed -
3 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
4 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
5 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
6 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
7 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.010G018400 expressed protein K02153: ATPeV0E, V-type H+-transporting ATPase subunit e
9 Sobic.004G293100 phosphatase, putative, expressed -
10 Sobic.002G406200 expressed protein -
11 Sobic.001G087900 expressed protein -
12 Sobic.003G344600 BAG domain containing protein, expressed -
13 Sobic.005G055000 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
14 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
15 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
16 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
17 Sobic.008G127500 expressed protein -
18 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
19 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
20 Sobic.003G271201 - -


Gene co-expression network
sample Sobic009G114500 Sobic009G114500 Sobic004G151400 Sobic004G151400 Sobic009G114500--Sobic004G151400 Sobic001G131400 Sobic001G131400 Sobic009G114500--Sobic001G131400 Sobic002G073800 Sobic002G073800 Sobic009G114500--Sobic002G073800 Sobic004G196300 Sobic004G196300 Sobic009G114500--Sobic004G196300 Sobic009G062000 Sobic009G062000 Sobic009G114500--Sobic009G062000 Sobic010G237000 Sobic010G237000 Sobic009G114500--Sobic010G237000 Sobic002G335300 Sobic002G335300 Sobic009G114500--Sobic002G335300 Sobic010G018400 Sobic010G018400 Sobic009G114500--Sobic010G018400 Sobic004G293100 Sobic004G293100 Sobic009G114500--Sobic004G293100 Sobic004G151400--Sobic001G131400 Sobic009G131100 Sobic009G131100 Sobic004G151400--Sobic009G131100 Sobic008G127500 Sobic008G127500 Sobic004G151400--Sobic008G127500 Sobic004G151400--Sobic009G114500 Sobic010G135000 Sobic010G135000 Sobic004G151400--Sobic010G135000 Sobic004G151400--Sobic004G293100 Sobic001G339801 Sobic001G339801 Sobic004G151400--Sobic001G339801 Sobic005G011400 Sobic005G011400 Sobic004G151400--Sobic005G011400 Sobic004G265700 Sobic004G265700 Sobic004G151400--Sobic004G265700 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic001G131400--Sobic010G135000 Sobic002G073800--Sobic010G018400 Sobic009G212200 Sobic009G212200 Sobic002G073800--Sobic009G212200 Sobic002G073800--Sobic008G127500 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700 Sobic004G196300--Sobic010G018400 Sobic003G249800 Sobic003G249800 Sobic004G196300--Sobic003G249800 Sobic001G309500 Sobic001G309500 Sobic004G196300--Sobic001G309500 Sobic004G196300--Sobic001G034700 Sobic003G155400 Sobic003G155400 Sobic004G196300--Sobic003G155400 Sobic002G078400 Sobic002G078400 Sobic004G196300--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G196300--Sobic006G182100 Sobic004G066800 Sobic004G066800 Sobic004G196300--Sobic004G066800 Sobic010G153100 Sobic010G153100 Sobic004G196300--Sobic010G153100 Sobic009G062000--Sobic001G304400 Sobic009G062000--Sobic001G095632 Sobic008G129400 Sobic008G129400 Sobic009G062000--Sobic008G129400 Sobic001G432000 Sobic001G432000 Sobic009G062000--Sobic001G432000 Sobic009G062000--Sobic010G018400 Sobic004G351500 Sobic004G351500 Sobic009G062000--Sobic004G351500 Sobic003G305100 Sobic003G305100 Sobic009G062000--Sobic003G305100 Sobic001G286200 Sobic001G286200 Sobic009G062000--Sobic001G286200 Sobic009G062000--Sobic002G073800 Sobic009G016201 Sobic009G016201 Sobic010G237000--Sobic009G016201 Sobic003G344600 Sobic003G344600 Sobic010G237000--Sobic003G344600 Sobic001G037000 Sobic001G037000 Sobic010G237000--Sobic001G037000 Sobic002G330000 Sobic002G330000 Sobic010G237000--Sobic002G330000 Sobic001G128400 Sobic001G128400 Sobic010G237000--Sobic001G128400 Sobic010G237000--Sobic003G249800 Sobic002G282400 Sobic002G282400 Sobic010G237000--Sobic002G282400 Sobic003G254800 Sobic003G254800 Sobic010G237000--Sobic003G254800 Sobic003G350300 Sobic003G350300 Sobic010G237000--Sobic003G350300 Sobic004G212900 Sobic004G212900 Sobic002G335300--Sobic004G212900 Sobic002G335300--Sobic003G344600 Sobic003G357300 Sobic003G357300 Sobic002G335300--Sobic003G357300 Sobic001G009500 Sobic001G009500 Sobic002G335300--Sobic001G009500 Sobic009G074100 Sobic009G074100 Sobic002G335300--Sobic009G074100 Sobic008G103700 Sobic008G103700 Sobic002G335300--Sobic008G103700 Sobic006G046900 Sobic006G046900 Sobic002G335300--Sobic006G046900 Sobic009G243400 Sobic009G243400 Sobic002G335300--Sobic009G243400 Sobic003G211200 Sobic003G211200 Sobic002G335300--Sobic003G211200 Sobic010G018400--Sobic008G129400 Sobic003G368500 Sobic003G368500 Sobic010G018400--Sobic003G368500 Sobic010G018400--Sobic003G155400 Sobic010G018400--Sobic009G176000 Sobic007G051000 Sobic007G051000 Sobic010G018400--Sobic007G051000 Sobic010G154700 Sobic010G154700 Sobic010G018400--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic010G018400--Sobic001G132100 Sobic001G048832 Sobic001G048832 Sobic010G018400--Sobic001G048832 Sobic001G445800 Sobic001G445800 Sobic010G018400--Sobic001G445800 Sobic003G015400 Sobic003G015400 Sobic004G293100--Sobic003G015400 Sobic002G263100 Sobic002G263100 Sobic004G293100--Sobic002G263100 Sobic009G024500 Sobic009G024500 Sobic004G293100--Sobic009G024500 Sobic004G293100--Sobic004G151400 Sobic004G293100--Sobic003G305100 Sobic008G021100 Sobic008G021100 Sobic004G293100--Sobic008G021100 Sobic007G177200 Sobic007G177200 Sobic004G293100--Sobic007G177200 Sobic007G134900 Sobic007G134900 Sobic004G293100--Sobic007G134900 Sobic004G293100--Sobic008G127500
Octagon: transcription factors


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