Gene annotation
Transcriptome id Sobic.006G201400.1
Synonym Sb06g027320
Functional annotation seed specific protein Bn15D1B, putative, expressed
UniProt C5YF42
Pfam -
Panther DB PTHR35122 PTHR35122:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03150 : -
RAP-DB (Rice) LOC_Os04g50970.1 : seed specific protein Bn15D1B, putative, expressed
MaizeGDB (Corn) Zm00025a056930 , Zm00025a009964
Brachypodium KQJ84358 , KQJ84359 , KQJ84357
Barley HORVU2Hr1G102620.1
Wheat TraesCS2B02G464400 , TraesCS2A02G443300 , TraesCS2D02G442500
Populus -


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cDNA sequences
Sobic.006G201400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G254300 peroxiredoxin, putative, expressed -
2 Sobic.004G024300 cyclin, putative, expressed -
3 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
4 Sobic.001G351000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
5 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
6 Sobic.009G212200 expressed protein -
7 Sobic.003G306100 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
8 Sobic.001G304400 expressed protein -
9 Sobic.001G432000 LYR motif containing protein, putative, expressed -
10 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
11 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
12 Sobic.002G128800 fiber protein Fb34, putative, expressed -
13 Sobic.003G050200 embryo-specific 3, putative, expressed -
14 Sobic.001G533000 expressed protein -
15 Sobic.001G130301 - K02971: RP-S21e, small subunit ribosomal protein S21e
16 Sobic.004G306200 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
17 Sobic.003G340800 transmembrane amino acid transporter protein, putative, expressed -
18 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
19 Sobic.001G054900 40S ribosomal protein S15, putative, expressed K02958: RP-S15e, small subunit ribosomal protein S15e
20 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase


Gene co-expression network
sample Sobic006G201400 Sobic006G201400 Sobic003G254300 Sobic003G254300 Sobic006G201400--Sobic003G254300 Sobic004G024300 Sobic004G024300 Sobic006G201400--Sobic004G024300 Sobic004G220000 Sobic004G220000 Sobic006G201400--Sobic004G220000 Sobic001G351000 Sobic001G351000 Sobic006G201400--Sobic001G351000 Sobic002G073800 Sobic002G073800 Sobic006G201400--Sobic002G073800 Sobic009G212200 Sobic009G212200 Sobic006G201400--Sobic009G212200 Sobic003G306100 Sobic003G306100 Sobic006G201400--Sobic003G306100 Sobic001G304400 Sobic001G304400 Sobic006G201400--Sobic001G304400 Sobic001G432000 Sobic001G432000 Sobic006G201400--Sobic001G432000 Sobic009G215200 Sobic009G215200 Sobic003G254300--Sobic009G215200 Sobic001G130301 Sobic001G130301 Sobic003G254300--Sobic001G130301 Sobic004G211833 Sobic004G211833 Sobic003G254300--Sobic004G211833 Sobic001G018900 Sobic001G018900 Sobic003G254300--Sobic001G018900 Sobic001G374700 Sobic001G374700 Sobic003G254300--Sobic001G374700 Sobic010G012500 Sobic010G012500 Sobic003G254300--Sobic010G012500 Sobic006G047400 Sobic006G047400 Sobic003G254300--Sobic006G047400 Sobic007G051000 Sobic007G051000 Sobic003G254300--Sobic007G051000 Sobic007G197800 Sobic007G197800 Sobic003G254300--Sobic007G197800 Sobic006G189700 Sobic006G189700 Sobic004G024300--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic004G024300--Sobic002G388700 Sobic008G103700 Sobic008G103700 Sobic004G024300--Sobic008G103700 Sobic009G243400 Sobic009G243400 Sobic004G024300--Sobic009G243400 Sobic002G335300 Sobic002G335300 Sobic004G024300--Sobic002G335300 Sobic004G171400 Sobic004G171400 Sobic004G024300--Sobic004G171400 Sobic010G198600 Sobic010G198600 Sobic004G024300--Sobic010G198600 Sobic002G396400 Sobic002G396400 Sobic004G024300--Sobic002G396400 Sobic009G148100 Sobic009G148100 Sobic004G024300--Sobic009G148100 Sobic005G113300 Sobic005G113300 Sobic004G220000--Sobic005G113300 Sobic004G220000--Sobic004G211833 Sobic004G220000--Sobic010G012500 Sobic002G398901 Sobic002G398901 Sobic004G220000--Sobic002G398901 Sobic001G295200 Sobic001G295200 Sobic004G220000--Sobic001G295200 Sobic006G083500 Sobic006G083500 Sobic004G220000--Sobic006G083500 Sobic009G188000 Sobic009G188000 Sobic004G220000--Sobic009G188000 Sobic001G361600 Sobic001G361600 Sobic004G220000--Sobic001G361600 Sobic004G220000--Sobic001G130301 Sobic004G065500 Sobic004G065500 Sobic001G351000--Sobic004G065500 Sobic001G351000--Sobic004G220000 Sobic001G351000--Sobic004G171400 Sobic001G459800 Sobic001G459800 Sobic001G351000--Sobic001G459800 Sobic006G267200 Sobic006G267200 Sobic001G351000--Sobic006G267200 Sobic009G141800 Sobic009G141800 Sobic001G351000--Sobic009G141800 Sobic003G393900 Sobic003G393900 Sobic001G351000--Sobic003G393900 Sobic001G351000--Sobic005G113300 Sobic003G228900 Sobic003G228900 Sobic001G351000--Sobic003G228900 Sobic010G018400 Sobic010G018400 Sobic002G073800--Sobic010G018400 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700 Sobic001G286200 Sobic001G286200 Sobic009G212200--Sobic001G286200 Sobic003G215700 Sobic003G215700 Sobic009G212200--Sobic003G215700 Sobic009G212200--Sobic001G304400 Sobic003G443300 Sobic003G443300 Sobic009G212200--Sobic003G443300 Sobic009G212200--Sobic002G356400 Sobic010G264300 Sobic010G264300 Sobic009G212200--Sobic010G264300 Sobic001G134400 Sobic001G134400 Sobic009G212200--Sobic001G134400 Sobic003G249700 Sobic003G249700 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic003G306100--Sobic001G351000 Sobic003G306100--Sobic004G065500 Sobic003G306100--Sobic001G034700 Sobic003G285800 Sobic003G285800 Sobic003G306100--Sobic003G285800 Sobic010G041600 Sobic010G041600 Sobic003G306100--Sobic010G041600 Sobic003G150000 Sobic003G150000 Sobic003G306100--Sobic003G150000 Sobic001G477300 Sobic001G477300 Sobic003G306100--Sobic001G477300 Sobic010G086200 Sobic010G086200 Sobic003G306100--Sobic010G086200 Sobic005G168100 Sobic005G168100 Sobic003G306100--Sobic005G168100 Sobic001G304400--Sobic003G443300 Sobic001G304400--Sobic001G432000 Sobic001G304400--Sobic001G286200 Sobic001G304400--Sobic003G249700 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic001G304400--Sobic003G150000 Sobic001G304400--Sobic009G062000 Sobic010G251600 Sobic010G251600 Sobic001G432000--Sobic010G251600 Sobic001G432000--Sobic005G168100 Sobic001G432000--Sobic001G304400 Sobic009G232900 Sobic009G232900 Sobic001G432000--Sobic009G232900 Sobic001G432000--Sobic007G019400 Sobic001G432000--Sobic003G150000 Sobic001G054900 Sobic001G054900 Sobic001G432000--Sobic001G054900 Sobic010G206200 Sobic010G206200 Sobic001G432000--Sobic010G206200 Sobic006G156000 Sobic006G156000 Sobic001G432000--Sobic006G156000
Octagon: transcription factors


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