Gene annotation
Transcriptome id Sobic.001G533000.1
Synonym Sb01g049610
Functional annotation expressed protein
UniProt C5X120
Pfam -
Panther DB PTHR35310
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39840 : -
RAP-DB (Rice) LOC_Os08g31760.1 : expressed protein
MaizeGDB (Corn) Zm00025a000215
Brachypodium KQJ98238
Barley HORVU0Hr1G017530.2 , HORVU0Hr1G017530.1
Wheat TraesCS6A02G375700 , TraesCS6D02G360600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G379600 methyltransferase, putative, expressed -
2 Sobic.006G137800 expressed protein -
3 Sobic.004G345500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
5 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
6 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
7 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
8 Sobic.004G171400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
10 Sobic.007G139100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
11 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
12 Sobic.001G226500 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
13 Sobic.007G002800 phospholipase C, putative, expressed -
14 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
15 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
16 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
17 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
18 Sobic.001G031700 nucleobase-ascorbate transporter, putative, expressed -
19 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
20 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e


Gene co-expression network
sample Sobic001G533000 Sobic001G533000 Sobic003G379600 Sobic003G379600 Sobic001G533000--Sobic003G379600 Sobic006G137800 Sobic006G137800 Sobic001G533000--Sobic006G137800 Sobic004G345500 Sobic004G345500 Sobic001G533000--Sobic004G345500 Sobic007G198000 Sobic007G198000 Sobic001G533000--Sobic007G198000 Sobic001G529400 Sobic001G529400 Sobic001G533000--Sobic001G529400 Sobic003G078200 Sobic003G078200 Sobic001G533000--Sobic003G078200 Sobic010G047100 Sobic010G047100 Sobic001G533000--Sobic010G047100 Sobic004G171400 Sobic004G171400 Sobic001G533000--Sobic004G171400 Sobic003G160700 Sobic003G160700 Sobic001G533000--Sobic003G160700 Sobic003G379600--Sobic006G137800 Sobic003G379600--Sobic007G198000 Sobic003G379600--Sobic001G533000 Sobic001G459900 Sobic001G459900 Sobic003G379600--Sobic001G459900 Sobic001G475500 Sobic001G475500 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G379600--Sobic003G160700 Sobic003G379600--Sobic004G345500 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic008G025600 Sobic008G025600 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic002G200600 Sobic002G200600 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic006G137800--Sobic008G050600 Sobic006G137800--Sobic006G159600 Sobic003G345100 Sobic003G345100 Sobic006G137800--Sobic003G345100 Sobic004G345500--Sobic003G160700 Sobic001G502900 Sobic001G502900 Sobic004G345500--Sobic001G502900 Sobic005G113300 Sobic005G113300 Sobic004G345500--Sobic005G113300 Sobic004G345500--Sobic001G475500 Sobic001G031700 Sobic001G031700 Sobic004G345500--Sobic001G031700 Sobic003G125650 Sobic003G125650 Sobic004G345500--Sobic003G125650 Sobic001G295200 Sobic001G295200 Sobic004G345500--Sobic001G295200 Sobic010G221300 Sobic010G221300 Sobic004G345500--Sobic010G221300 Sobic007G197800 Sobic007G197800 Sobic004G345500--Sobic007G197800 Sobic003G347900 Sobic003G347900 Sobic007G198000--Sobic003G347900 Sobic006G057200 Sobic006G057200 Sobic007G198000--Sobic006G057200 Sobic007G198000--Sobic001G529400 Sobic010G070500 Sobic010G070500 Sobic007G198000--Sobic010G070500 Sobic007G198000--Sobic003G160700 Sobic007G198000--Sobic010G047100 Sobic007G198000--Sobic001G475500 Sobic003G027400 Sobic003G027400 Sobic007G198000--Sobic003G027400 Sobic007G198000--Sobic003G379600 Sobic001G313200 Sobic001G313200 Sobic001G529400--Sobic001G313200 Sobic001G529400--Sobic010G047100 Sobic006G191800 Sobic006G191800 Sobic001G529400--Sobic006G191800 Sobic009G015900 Sobic009G015900 Sobic001G529400--Sobic009G015900 Sobic001G529400--Sobic003G347900 Sobic001G529400--Sobic010G221300 Sobic001G529400--Sobic003G078200 Sobic001G529400--Sobic006G137800 Sobic003G057100 Sobic003G057100 Sobic001G529400--Sobic003G057100 Sobic002G372400 Sobic002G372400 Sobic003G078200--Sobic002G372400 Sobic009G054800 Sobic009G054800 Sobic003G078200--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic003G078200--Sobic010G206200 Sobic005G019700 Sobic005G019700 Sobic003G078200--Sobic005G019700 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic009G050300 Sobic009G050300 Sobic003G078200--Sobic009G050300 Sobic001G018900 Sobic001G018900 Sobic003G078200--Sobic001G018900 Sobic006G116700 Sobic006G116700 Sobic003G078200--Sobic006G116700 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic004G041900 Sobic004G041900 Sobic010G047100--Sobic004G041900 Sobic010G047100--Sobic006G191800 Sobic010G047100--Sobic010G221300 Sobic010G047100--Sobic001G031700 Sobic010G047100--Sobic003G160700 Sobic003G322532 Sobic003G322532 Sobic010G047100--Sobic003G322532 Sobic010G047100--Sobic003G125650 Sobic005G011300 Sobic005G011300 Sobic004G171400--Sobic005G011300 Sobic003G393900 Sobic003G393900 Sobic004G171400--Sobic003G393900 Sobic004G141200 Sobic004G141200 Sobic004G171400--Sobic004G141200 Sobic004G171400--Sobic001G140900 Sobic004G100700 Sobic004G100700 Sobic004G171400--Sobic004G100700 Sobic003G228900 Sobic003G228900 Sobic004G171400--Sobic003G228900 Sobic001G459800 Sobic001G459800 Sobic004G171400--Sobic001G459800 Sobic002G188900 Sobic002G188900 Sobic004G171400--Sobic002G188900 Sobic003G369100 Sobic003G369100 Sobic004G171400--Sobic003G369100 Sobic003G160700--Sobic005G113300 Sobic003G160700--Sobic004G041900 Sobic003G160700--Sobic003G125650 Sobic003G160700--Sobic003G078200 Sobic003G160700--Sobic001G475500 Sobic003G160700--Sobic001G502900 Sobic004G220000 Sobic004G220000 Sobic003G160700--Sobic004G220000 Sobic009G188000 Sobic009G188000 Sobic003G160700--Sobic009G188000 Sobic003G436700 Sobic003G436700 Sobic003G160700--Sobic003G436700
Octagon: transcription factors


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