Gene annotation
Transcriptome id Sobic.007G002800.1
Synonym Sb07g000450
Functional annotation phospholipase C, putative, expressed
UniProt C5YLE3
Pfam -
Panther DB PTHR13593 PTHR13593:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G36945 : PLC-like phosphodiesterases superfamily protein
RAP-DB (Rice) LOC_Os08g01310.1 : phospholipase C, putative, expressed
MaizeGDB (Corn) Zm00025a033672
Brachypodium KQJ94776
Barley HORVU0Hr1G009850.2 , HORVU0Hr1G009850.1 , HORVU0Hr1G014030.2 , HORVU0Hr1G014030.1 , HORVU7Hr1G077970.13 , HORVU7Hr1G077970.12 , HORVU7Hr1G077970.11 , HORVU7Hr1G077970.10 , HORVU0Hr1G009850.3 , HORVU7Hr1G077970.3 , HORVU7Hr1G077970.2 , HORVU7Hr1G077970.1 , HORVU7Hr1G077970.7 , HORVU7Hr1G077970.6 , HORVU7Hr1G077970.5 , HORVU7Hr1G077970.4 , HORVU7Hr1G077970.9 , HORVU7Hr1G077970.8
Wheat TraesCS7A02G326200 , TraesCS7D02G322900 , TraesCS7B02G226800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
2 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
3 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
4 Sobic.009G054800 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
5 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.002G255300 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
8 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.003G436700 40S ribosomal protein S10, putative, expressed K02947: RP-S10e, small subunit ribosomal protein S10e
10 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
11 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
12 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
13 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
14 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
15 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
16 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
17 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
18 Sobic.003G037800 transferase family protein, putative, expressed -
19 Sobic.003G160700 RALFL8 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e


Gene co-expression network
sample Sobic007G002800 Sobic007G002800 Sobic004G055100 Sobic004G055100 Sobic007G002800--Sobic004G055100 Sobic002G175100 Sobic002G175100 Sobic007G002800--Sobic002G175100 Sobic004G331400 Sobic004G331400 Sobic007G002800--Sobic004G331400 Sobic009G054800 Sobic009G054800 Sobic007G002800--Sobic009G054800 Sobic006G103000 Sobic006G103000 Sobic007G002800--Sobic006G103000 Sobic010G085800 Sobic010G085800 Sobic007G002800--Sobic010G085800 Sobic002G255300 Sobic002G255300 Sobic007G002800--Sobic002G255300 Sobic001G310300 Sobic001G310300 Sobic007G002800--Sobic001G310300 Sobic003G436700 Sobic003G436700 Sobic007G002800--Sobic003G436700 Sobic010G070500 Sobic010G070500 Sobic004G055100--Sobic010G070500 Sobic003G078200 Sobic003G078200 Sobic004G055100--Sobic003G078200 Sobic010G251600 Sobic010G251600 Sobic004G055100--Sobic010G251600 Sobic004G055100--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic004G055100--Sobic010G206200 Sobic002G414700 Sobic002G414700 Sobic004G055100--Sobic002G414700 Sobic004G055100--Sobic003G436700 Sobic001G226500 Sobic001G226500 Sobic004G055100--Sobic001G226500 Sobic001G175300 Sobic001G175300 Sobic004G055100--Sobic001G175300 Sobic002G175100--Sobic004G331400 Sobic001G374700 Sobic001G374700 Sobic002G175100--Sobic001G374700 Sobic009G215200 Sobic009G215200 Sobic002G175100--Sobic009G215200 Sobic006G116700 Sobic006G116700 Sobic002G175100--Sobic006G116700 Sobic001G091801 Sobic001G091801 Sobic002G175100--Sobic001G091801 Sobic006G047400 Sobic006G047400 Sobic002G175100--Sobic006G047400 Sobic009G050300 Sobic009G050300 Sobic002G175100--Sobic009G050300 Sobic002G081600 Sobic002G081600 Sobic002G175100--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic002G175100--Sobic003G346600 Sobic004G331400--Sobic002G175100 Sobic001G376600 Sobic001G376600 Sobic004G331400--Sobic001G376600 Sobic009G163800 Sobic009G163800 Sobic004G331400--Sobic009G163800 Sobic009G105700 Sobic009G105700 Sobic004G331400--Sobic009G105700 Sobic003G408100 Sobic003G408100 Sobic004G331400--Sobic003G408100 Sobic004G331400--Sobic003G346600 Sobic004G331400--Sobic009G050300 Sobic007G178600 Sobic007G178600 Sobic004G331400--Sobic007G178600 Sobic004G331400--Sobic001G091801 Sobic009G054800--Sobic003G078200 Sobic009G054800--Sobic010G206200 Sobic002G372400 Sobic002G372400 Sobic009G054800--Sobic002G372400 Sobic005G019700 Sobic005G019700 Sobic009G054800--Sobic005G019700 Sobic007G197800 Sobic007G197800 Sobic009G054800--Sobic007G197800 Sobic010G230700 Sobic010G230700 Sobic009G054800--Sobic010G230700 Sobic009G054800--Sobic009G050300 Sobic004G198400 Sobic004G198400 Sobic009G054800--Sobic004G198400 Sobic009G054800--Sobic006G116700 Sobic001G402200 Sobic001G402200 Sobic006G103000--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic006G103000--Sobic006G268800 Sobic001G231700 Sobic001G231700 Sobic006G103000--Sobic001G231700 Sobic001G367600 Sobic001G367600 Sobic006G103000--Sobic001G367600 Sobic009G240600 Sobic009G240600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic003G007600 Sobic003G007600 Sobic006G103000--Sobic003G007600 Sobic007G227300 Sobic007G227300 Sobic006G103000--Sobic007G227300 Sobic001G500000 Sobic001G500000 Sobic006G103000--Sobic001G500000 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic010G085800--Sobic001G310300 Sobic010G008400 Sobic010G008400 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic010G085800--Sobic008G009400 Sobic009G088900 Sobic009G088900 Sobic010G085800--Sobic009G088900 Sobic003G311800 Sobic003G311800 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic004G008400 Sobic004G008400 Sobic002G255300--Sobic004G008400 Sobic002G255300--Sobic009G163800 Sobic002G255300--Sobic003G346600 Sobic009G076400 Sobic009G076400 Sobic002G255300--Sobic009G076400 Sobic002G255300--Sobic007G178600 Sobic002G255300--Sobic004G331400 Sobic010G060500 Sobic010G060500 Sobic002G255300--Sobic010G060500 Sobic002G255300--Sobic007G197800 Sobic002G255300--Sobic009G050300 Sobic006G203700 Sobic006G203700 Sobic001G310300--Sobic006G203700 Sobic001G310300--Sobic010G085800 Sobic001G514200 Sobic001G514200 Sobic001G310300--Sobic001G514200 Sobic008G055100 Sobic008G055100 Sobic001G310300--Sobic008G055100 Sobic001G481000 Sobic001G481000 Sobic001G310300--Sobic001G481000 Sobic001G310300--Sobic009G109000 Sobic001G310300--Sobic010G008400 Sobic008G005100 Sobic008G005100 Sobic001G310300--Sobic008G005100 Sobic003G160700 Sobic003G160700 Sobic001G310300--Sobic003G160700 Sobic003G436700--Sobic004G008400 Sobic003G436700--Sobic006G116700 Sobic003G436700--Sobic009G050300 Sobic003G436700--Sobic010G251600 Sobic006G067800 Sobic006G067800 Sobic003G436700--Sobic006G067800 Sobic003G436700--Sobic007G178600 Sobic003G436700--Sobic002G081600 Sobic003G436700--Sobic009G215200 Sobic002G379500 Sobic002G379500 Sobic003G436700--Sobic002G379500
Octagon: transcription factors


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