Gene annotation
| Transcriptome id | Sobic.001G012500.2,Sobic.001G012500.1 |
|---|---|
| Synonym | SbGST1;SbGST1;SbGST1, ATGSTF13, Sb01g001230 |
| Functional annotation | similar to Glutathione S transferase 1 (PubMedID : 24655390) "Glutathione S transferase 1, up-regulated under all the stress condition" (PubMedID : 24655390) similar to Glutathione S transferase 1 (PubMedID : 24655390) Glutathione S transferase 1 (PubMedID : 24655390) glutathione S-transferase, putative, expressed |
| UniProt | A0A1B6QGT8 , A0A1B6QGT1 |
| Pfam | PF00043 PF02798 |
| Panther DB | PTHR11260 PTHR11260:SF262 |
| NCBI CDD | KOG0867; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT3G62760 : Glutathione S-transferase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g55830.1 : glutathione S-transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a039958 , Zm00025a055402 |
| Brachypodium | KQK05885 |
| Barley | HORVU3Hr1G074020.1 , HORVU3Hr1G074020.2 , HORVU3Hr1G074020.3 , HORVU3Hr1G074020.4 , HORVU3Hr1G074020.5 , HORVU5Hr1G006630.2 , HORVU5Hr1G006630.3 , HORVU5Hr1G006630.1 , HORVU5Hr1G006630.4 , HORVU5Hr1G006630.5 , HORVU3Hr1G074000.6 , HORVU3Hr1G074000.7 , HORVU3Hr1G074000.4 , HORVU3Hr1G074000.5 , HORVU3Hr1G074000.2 , HORVU3Hr1G074000.3 , HORVU3Hr1G074000.1 |
| Wheat | TraesCS7D02G479100 , TraesCS1D02G095400 , TraesCS3A02G302300 , TraesCS7B02G398800 , TraesCS3B02G334300 , TraesCS1D02G094800 , TraesCS1A02G078800 , TraesCS3D02G299700 , TraesCS3D02G299700 , TraesCS1B02G113600 |
| Populus | - |
JBrowse
| Sobic.001G012500 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G012400 | "UDP-glucose glucosyltransferase, up-regulated under drought stress "(PubMedID : 24655390)@p-hydroxymandelonitrile-O-glucosyltransferase(PubMedID : 10585420)@-(PubMedID : 27964718)@UDP-glucose:p-hydroxymandelonitrile-O-glucosyltransferase. in vitro substrate regiospecificity(PubMedID : 12946413)@"Cyanohydrin beta-glucosyltransferase, similar to UDP-glucose glucosyltransferase, dhurrin biosynthesis"(PubMedID : 10585420)@cytokinin-O-glucosyltransferase 2, putative, expressed | K13030: cyanohydrin beta-glucosyltransferase |
| 2 | Sobic.002G347300 | copper methylamine oxidase precursor, putative, expressed | K00276: AOC3, AOC2, primary-amine oxidase |
| 3 | Sobic.001G012600 | MATE efflux family protein, putative, expressed | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 4 | Sobic.002G338400 | uncharacterized secreted protein, putative, expressed | - |
| 5 | Sobic.001G035600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein | K01859: chalcone isomerase |
| 6 | Sobic.001G012200 | similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed | K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase |
| 7 | Sobic.001G012300 | "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed | K13027: tyrosine N-monooxygenase |
| 8 | Sobic.003G340800 | transmembrane amino acid transporter protein, putative, expressed | - |
| 9 | Sobic.009G232200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed | - |
| 10 | Sobic.004G099900 | early nodulin 93 ENOD93 protein, putative, expressed | - |
| 11 | Sobic.006G038200 | receptor protein kinase, putative, expressed | - |
| 12 | Sobic.001G344700 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed | - |
| 13 | Sobic.004G282700 | synthase, putative, expressed | K12451: 3,5-epimerase/4-reductase |
| 14 | Sobic.002G073800 | vacuolar ATPase G subunit, putative, expressed | K02152: ATPeV1G, V-type H+-transporting ATPase subunit G |
| 15 | Sobic.009G062000 | ribosomal protein L51, putative, expressed | K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 |
| 16 | Sobic.010G162400 | reticuline oxidase-like protein precursor, putative, expressed | - |
| 17 | Sobic.004G059600 | DUF581 domain containing protein, expressed | - |
| 18 | Sobic.002G252000 | CHIT13 - Chitinase family protein precursor, expressed | - |
| 19 | Sobic.001G444800 | ubiquitin fusion protein, putative, expressed | K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e |
| 20 | Sobic.006G201400 | seed specific protein Bn15D1B, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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