Gene annotation
Transcriptome id Sobic.001G344700.1
Synonym Sb01g033080
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
jacalin-like lectin domain containing protein, expressed
UniProt A0A1B6QMN9
Pfam PF01419
Panther DB PTHR23244 PTHR23244:SF320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73040 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os04g30040.2 : jacalin-like lectin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052149
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G344800 jacalin-like lectin domain containing protein, expressed -
2 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
4 Sobic.004G272700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
6 Sobic.004G328601 - K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
7 Sobic.004G099900 early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.005G155200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
10 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
11 Sobic.006G201400 seed specific protein Bn15D1B, putative, expressed -
12 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
13 Sobic.007G100425 - -
14 Sobic.003G333800 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
15 Sobic.002G421200 IN2-1 protein, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.001G014000 P21-Rho-binding domain containing protein, putative, expressed -
17 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
18 Sobic.003G202000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
19 Sobic.004G245600 expressed protein -
20 Sobic.001G256000 expressed protein -


Gene co-expression network
sample Sobic001G344700 Sobic001G344700 Sobic001G344800 Sobic001G344800 Sobic001G344700--Sobic001G344800 Sobic001G012500 Sobic001G012500 Sobic001G344700--Sobic001G012500 Sobic002G338400 Sobic002G338400 Sobic001G344700--Sobic002G338400 Sobic004G272700 Sobic004G272700 Sobic001G344700--Sobic004G272700 Sobic002G073800 Sobic002G073800 Sobic001G344700--Sobic002G073800 Sobic004G328601 Sobic004G328601 Sobic001G344700--Sobic004G328601 Sobic004G099900 Sobic004G099900 Sobic001G344700--Sobic004G099900 Sobic005G063300 Sobic005G063300 Sobic001G344700--Sobic005G063300 Sobic005G155200 Sobic005G155200 Sobic001G344700--Sobic005G155200 Sobic001G344800--Sobic001G344700 Sobic001G344800--Sobic004G328601 Sobic001G344800--Sobic004G272700 Sobic001G502500 Sobic001G502500 Sobic001G344800--Sobic001G502500 Sobic001G170700 Sobic001G170700 Sobic001G344800--Sobic001G170700 Sobic001G344800--Sobic002G338400 Sobic010G074600 Sobic010G074600 Sobic001G344800--Sobic010G074600 Sobic001G035600 Sobic001G035600 Sobic001G344800--Sobic001G035600 Sobic001G344800--Sobic002G073800 Sobic001G012400 Sobic001G012400 Sobic001G012500--Sobic001G012400 Sobic002G347300 Sobic002G347300 Sobic001G012500--Sobic002G347300 Sobic001G012600 Sobic001G012600 Sobic001G012500--Sobic001G012600 Sobic001G012500--Sobic002G338400 Sobic001G012500--Sobic001G035600 Sobic001G012200 Sobic001G012200 Sobic001G012500--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic001G012500--Sobic001G012300 Sobic003G340800 Sobic003G340800 Sobic001G012500--Sobic003G340800 Sobic009G232200 Sobic009G232200 Sobic001G012500--Sobic009G232200 Sobic002G252000 Sobic002G252000 Sobic002G338400--Sobic002G252000 Sobic002G338400--Sobic009G232200 Sobic002G396400 Sobic002G396400 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200 Sobic007G088000 Sobic007G088000 Sobic004G272700--Sobic007G088000 Sobic002G379600 Sobic002G379600 Sobic004G272700--Sobic002G379600 Sobic003G306100 Sobic003G306100 Sobic004G272700--Sobic003G306100 Sobic010G083500 Sobic010G083500 Sobic004G272700--Sobic010G083500 Sobic004G332900 Sobic004G332900 Sobic004G272700--Sobic004G332900 Sobic010G019900 Sobic010G019900 Sobic004G272700--Sobic010G019900 Sobic004G272700--Sobic001G344800 Sobic010G178200 Sobic010G178200 Sobic004G272700--Sobic010G178200 Sobic010G165500 Sobic010G165500 Sobic004G272700--Sobic010G165500 Sobic010G018400 Sobic010G018400 Sobic002G073800--Sobic010G018400 Sobic009G212200 Sobic009G212200 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700 Sobic004G328900 Sobic004G328900 Sobic004G328601--Sobic004G328900 Sobic004G328601--Sobic001G502500 Sobic001G345900 Sobic001G345900 Sobic004G328601--Sobic001G345900 Sobic007G181000 Sobic007G181000 Sobic004G328601--Sobic007G181000 Sobic001G379300 Sobic001G379300 Sobic004G328601--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic004G328601--Sobic001G255300 Sobic003G317800 Sobic003G317800 Sobic004G328601--Sobic003G317800 Sobic006G238100 Sobic006G238100 Sobic004G328601--Sobic006G238100 Sobic002G128600 Sobic002G128600 Sobic004G328601--Sobic002G128600 Sobic004G099900--Sobic002G073800 Sobic001G478000 Sobic001G478000 Sobic004G099900--Sobic001G478000 Sobic001G388600 Sobic001G388600 Sobic004G099900--Sobic001G388600 Sobic003G244200 Sobic003G244200 Sobic004G099900--Sobic003G244200 Sobic007G100425 Sobic007G100425 Sobic004G099900--Sobic007G100425 Sobic003G216500 Sobic003G216500 Sobic004G099900--Sobic003G216500 Sobic010G103900 Sobic010G103900 Sobic004G099900--Sobic010G103900 Sobic004G099900--Sobic010G018400 Sobic001G005900 Sobic001G005900 Sobic004G099900--Sobic001G005900 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic007G032700 Sobic007G032700 Sobic005G155200--Sobic007G032700 Sobic010G275100 Sobic010G275100 Sobic005G155200--Sobic010G275100 Sobic003G021900 Sobic003G021900 Sobic005G155200--Sobic003G021900 Sobic005G155200--Sobic005G063300 Sobic001G354200 Sobic001G354200 Sobic005G155200--Sobic001G354200 Sobic009G221600 Sobic009G221600 Sobic005G155200--Sobic009G221600 Sobic010G032100 Sobic010G032100 Sobic005G155200--Sobic010G032100 Sobic004G236100 Sobic004G236100 Sobic005G155200--Sobic004G236100 Sobic009G161500 Sobic009G161500 Sobic005G155200--Sobic009G161500
Octagon: transcription factors


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