Gene annotation
Transcriptome id Sobic.005G155200.1
Synonym PSK2, Sb05g021760, ATPSK2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phytosulfokines precursor, putative, expressed
UniProt A0A1B6PSQ9
Pfam PF06404
Panther DB PTHR33285:SF1 PTHR33285
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005576; extracellular region GO:0008083growth factor activity GO:0008283cell population proliferation


Orthologs (automatic annotation)
TAIR AT2G22860 : phytosulfokine 2 precursor
RAP-DB (Rice) LOC_Os03g12990.1 : phytosulfokines precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015758
Brachypodium KQK20916
Barley HORVU4Hr1G026200.1
Wheat TraesCS4B02G131900 , TraesCS2B02G275300 , TraesCS2B02G275300 , TraesCS4D02G126700 , TraesCS2D02G256900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G032700 - -
2 Sobic.010G275100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
3 Sobic.003G021900 cytochrome P450, putative, expressed K09832: sterol 22-desaturase
4 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
5 Sobic.001G354200 O-methyltransferase, putative, expressed -
6 Sobic.009G221600 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.009G161500 - -
10 Sobic.009G229000 expressed protein -
11 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
12 Sobic.001G481500 - -
13 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
14 Sobic.001G525200 expressed protein -
15 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
16 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
18 Sobic.010G015300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
19 Sobic.006G249300 expressed protein -
20 Sobic.005G215601 - -


Gene co-expression network
sample Sobic005G155200 Sobic005G155200 Sobic007G032700 Sobic007G032700 Sobic005G155200--Sobic007G032700 Sobic010G275100 Sobic010G275100 Sobic005G155200--Sobic010G275100 Sobic003G021900 Sobic003G021900 Sobic005G155200--Sobic003G021900 Sobic005G063300 Sobic005G063300 Sobic005G155200--Sobic005G063300 Sobic001G354200 Sobic001G354200 Sobic005G155200--Sobic001G354200 Sobic009G221600 Sobic009G221600 Sobic005G155200--Sobic009G221600 Sobic010G032100 Sobic010G032100 Sobic005G155200--Sobic010G032100 Sobic004G236100 Sobic004G236100 Sobic005G155200--Sobic004G236100 Sobic009G161500 Sobic009G161500 Sobic005G155200--Sobic009G161500 Sobic007G032700--Sobic004G236100 Sobic004G336500 Sobic004G336500 Sobic007G032700--Sobic004G336500 Sobic007G008100 Sobic007G008100 Sobic007G032700--Sobic007G008100 Sobic001G525200 Sobic001G525200 Sobic007G032700--Sobic001G525200 Sobic007G032700--Sobic010G032100 Sobic001G054500 Sobic001G054500 Sobic007G032700--Sobic001G054500 Sobic007G032700--Sobic001G354200 Sobic009G229000 Sobic009G229000 Sobic007G032700--Sobic009G229000 Sobic007G032700--Sobic005G155200 Sobic006G032700 Sobic006G032700 Sobic010G275100--Sobic006G032700 Sobic010G275100--Sobic001G354200 Sobic001G481500 Sobic001G481500 Sobic010G275100--Sobic001G481500 Sobic003G138300 Sobic003G138300 Sobic010G275100--Sobic003G138300 Sobic001G397200 Sobic001G397200 Sobic010G275100--Sobic001G397200 Sobic010G275100--Sobic010G032100 Sobic001G309600 Sobic001G309600 Sobic010G275100--Sobic001G309600 Sobic010G031100 Sobic010G031100 Sobic010G275100--Sobic010G031100 Sobic002G215300 Sobic002G215300 Sobic010G275100--Sobic002G215300 Sobic003G021900--Sobic010G031100 Sobic009G148100 Sobic009G148100 Sobic003G021900--Sobic009G148100 Sobic003G021900--Sobic010G032100 Sobic006G249300 Sobic006G249300 Sobic003G021900--Sobic006G249300 Sobic003G021900--Sobic002G215300 Sobic003G021900--Sobic003G138300 Sobic003G021900--Sobic001G309600 Sobic002G323300 Sobic002G323300 Sobic003G021900--Sobic002G323300 Sobic003G021900--Sobic004G336500 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic003G255200 Sobic003G255200 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic001G354200--Sobic006G032700 Sobic001G354200--Sobic001G397200 Sobic001G354200--Sobic010G275100 Sobic001G354200--Sobic010G032100 Sobic001G354200--Sobic003G138300 Sobic001G354200--Sobic001G481500 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic001G354200--Sobic009G229000 Sobic004G099500 Sobic004G099500 Sobic009G221600--Sobic004G099500 Sobic007G045700 Sobic007G045700 Sobic009G221600--Sobic007G045700 Sobic004G271400 Sobic004G271400 Sobic009G221600--Sobic004G271400 Sobic002G414600 Sobic002G414600 Sobic009G221600--Sobic002G414600 Sobic002G414700 Sobic002G414700 Sobic009G221600--Sobic002G414700 Sobic006G136800 Sobic006G136800 Sobic009G221600--Sobic006G136800 Sobic010G057100 Sobic010G057100 Sobic009G221600--Sobic010G057100 Sobic008G041400 Sobic008G041400 Sobic009G221600--Sobic008G041400 Sobic001G252300 Sobic001G252300 Sobic009G221600--Sobic001G252300 Sobic010G032100--Sobic001G397200 Sobic002G068600 Sobic002G068600 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic002G261200 Sobic002G261200 Sobic010G032100--Sobic002G261200 Sobic001G149800 Sobic001G149800 Sobic010G032100--Sobic001G149800 Sobic010G032100--Sobic001G309600 Sobic010G032100--Sobic006G032700 Sobic003G394400 Sobic003G394400 Sobic010G032100--Sobic003G394400 Sobic010G032100--Sobic001G481500 Sobic004G236100--Sobic004G336500 Sobic009G069800 Sobic009G069800 Sobic004G236100--Sobic009G069800 Sobic004G236100--Sobic007G008100 Sobic004G236100--Sobic001G054500 Sobic002G042000 Sobic002G042000 Sobic004G236100--Sobic002G042000 Sobic004G236100--Sobic001G525200 Sobic004G236100--Sobic010G032100 Sobic004G236100--Sobic009G229000 Sobic004G236100--Sobic001G354200 Sobic009G161500--Sobic009G229000 Sobic004G166700 Sobic004G166700 Sobic009G161500--Sobic004G166700 Sobic002G125700 Sobic002G125700 Sobic009G161500--Sobic002G125700 Sobic001G247600 Sobic001G247600 Sobic009G161500--Sobic001G247600 Sobic006G092500 Sobic006G092500 Sobic009G161500--Sobic006G092500 Sobic006G211200 Sobic006G211200 Sobic009G161500--Sobic006G211200 Sobic007G087200 Sobic007G087200 Sobic009G161500--Sobic007G087200 Sobic009G159200 Sobic009G159200 Sobic009G161500--Sobic009G159200 Sobic003G393700 Sobic003G393700 Sobic009G161500--Sobic003G393700
Octagon: transcription factors


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