Gene annotation
Transcriptome id Sobic.001G525200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQV0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g03334.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G145400 expressed protein -
2 Sobic.002G104200 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase
3 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
5 Sobic.008G162700 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
6 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
8 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
9 Sobic.004G067600 expressed protein -
10 Sobic.006G230700 wound induced protein, putative, expressed -
11 Sobic.002G115025 - -
12 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
13 Sobic.006G217900 Leucine-rich receptor-like protein kinase("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed K13420: LRR receptor-like serine/threonine-protein kinase FLS2
14 Sobic.009G182900 - -
15 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.001G054500 expressed protein -
17 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
19 Sobic.010G225251 - -
20 Sobic.005G215601 - -


Gene co-expression network
sample Sobic001G525200 Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic004G236100 Sobic004G236100 Sobic001G525200--Sobic004G236100 Sobic009G069800 Sobic009G069800 Sobic001G525200--Sobic009G069800 Sobic008G162700 Sobic008G162700 Sobic001G525200--Sobic008G162700 Sobic002G042000 Sobic002G042000 Sobic001G525200--Sobic002G042000 Sobic010G031100 Sobic010G031100 Sobic001G525200--Sobic010G031100 Sobic004G336500 Sobic004G336500 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic003G145400--Sobic001G525200 Sobic006G230700 Sobic006G230700 Sobic003G145400--Sobic006G230700 Sobic003G145400--Sobic009G069800 Sobic003G145400--Sobic010G031100 Sobic003G145400--Sobic008G162700 Sobic006G190500 Sobic006G190500 Sobic003G145400--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic003G145400--Sobic006G230800 Sobic003G145400--Sobic004G236100 Sobic003G145400--Sobic004G336500 Sobic002G104200--Sobic001G525200 Sobic002G104200--Sobic003G145400 Sobic001G280800 Sobic001G280800 Sobic002G104200--Sobic001G280800 Sobic007G144501 Sobic007G144501 Sobic002G104200--Sobic007G144501 Sobic004G210700 Sobic004G210700 Sobic002G104200--Sobic004G210700 Sobic002G104200--Sobic008G162700 Sobic009G182900 Sobic009G182900 Sobic002G104200--Sobic009G182900 Sobic002G104200--Sobic004G236100 Sobic002G104200--Sobic002G042000 Sobic004G236100--Sobic004G336500 Sobic004G236100--Sobic009G069800 Sobic007G008100 Sobic007G008100 Sobic004G236100--Sobic007G008100 Sobic001G054500 Sobic001G054500 Sobic004G236100--Sobic001G054500 Sobic004G236100--Sobic002G042000 Sobic004G236100--Sobic001G525200 Sobic010G032100 Sobic010G032100 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic001G354200 Sobic001G354200 Sobic004G236100--Sobic001G354200 Sobic009G069800--Sobic004G336500 Sobic009G069800--Sobic007G008100 Sobic010G225251 Sobic010G225251 Sobic009G069800--Sobic010G225251 Sobic009G069800--Sobic002G042000 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic009G069800--Sobic004G236100 Sobic010G166500 Sobic010G166500 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic008G162700--Sobic001G525200 Sobic008G162700--Sobic003G145400 Sobic008G162700--Sobic004G336500 Sobic010G198600 Sobic010G198600 Sobic008G162700--Sobic010G198600 Sobic008G162700--Sobic010G031100 Sobic008G162700--Sobic010G225251 Sobic008G162700--Sobic009G069800 Sobic008G162700--Sobic001G280800 Sobic009G148100 Sobic009G148100 Sobic008G162700--Sobic009G148100 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G040900 Sobic002G040900 Sobic002G042000--Sobic002G040900 Sobic003G364300 Sobic003G364300 Sobic002G042000--Sobic003G364300 Sobic002G042000--Sobic009G069800 Sobic001G256200 Sobic001G256200 Sobic002G042000--Sobic001G256200 Sobic006G101300 Sobic006G101300 Sobic002G042000--Sobic006G101300 Sobic004G148100 Sobic004G148100 Sobic002G042000--Sobic004G148100 Sobic007G008000 Sobic007G008000 Sobic002G042000--Sobic007G008000 Sobic010G031100--Sobic010G032100 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600 Sobic004G067600--Sobic004G236100 Sobic004G067600--Sobic009G069800 Sobic004G067600--Sobic001G525200 Sobic004G067600--Sobic004G336500 Sobic004G067600--Sobic003G145400 Sobic004G067600--Sobic007G008100 Sobic004G067600--Sobic003G041600 Sobic004G067600--Sobic002G042000 Sobic004G067600--Sobic010G032100
Octagon: transcription factors


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