Gene annotation
Transcriptome id Sobic.002G104200.1
Synonym HPD, PDS1, Sb02g008850
Functional annotation glyoxalase family protein, putative, expressed
UniProt C5X3I2
Pfam PF00903
Panther DB PTHR11959 PTHR11959:SF7
NCBI CDD KOG0638; 4-hydroxyphenylpyruvate dioxygenase
KEGG Orthology K00457; HPD, 4-hydroxyphenylpyruvate dioxygenase
Gene Ontology GO:0016701; oxidoreductase activity, acting on single donors with incorporation of molecular oxygen GO:0009072aromatic amino acid family metabolic process GO:00038684-hydroxyphenylpyruvate dioxygenase activity


Orthologs (automatic annotation)
TAIR AT1G06570 : phytoene desaturation 1
RAP-DB (Rice) LOC_Os02g07160.1 : glyoxalase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a045590 , Zm00025a019061
Brachypodium -
Barley HORVU6Hr1G027650.10 , HORVU6Hr1G027650.11 , HORVU6Hr1G027650.12 , HORVU6Hr1G027650.13 , HORVU6Hr1G027650.8 , HORVU6Hr1G027650.9 , HORVU6Hr1G027650.2 , HORVU6Hr1G027650.6 , HORVU6Hr1G027650.7 , HORVU6Hr1G027650.5 , HORVU6Hr1G027650.3
Wheat TraesCS6D02G130800 , TraesCS6B02G169700 , TraesCS1B02G035800 , TraesCS6A02G141500 , TraesCS6A02G141500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525200 expressed protein -
2 Sobic.003G145400 expressed protein -
3 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.007G144501 - -
5 Sobic.004G210700 ATOZI1, putative, expressed -
6 Sobic.008G162700 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
7 Sobic.009G182900 - -
8 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
11 Sobic.002G115025 - -
12 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
14 Sobic.003G345600 expressed protein -
15 Sobic.005G215601 - -
16 Sobic.006G230700 wound induced protein, putative, expressed -
17 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
18 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.001G279300 Up-reguralion under heat(PubMedID : 24916767)@VQ domain containing protein, putative, expressed -
20 Sobic.001G256200 expressed protein -


Gene co-expression network
sample Sobic002G104200 Sobic002G104200 Sobic001G525200 Sobic001G525200 Sobic002G104200--Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic002G104200--Sobic003G145400 Sobic001G280800 Sobic001G280800 Sobic002G104200--Sobic001G280800 Sobic007G144501 Sobic007G144501 Sobic002G104200--Sobic007G144501 Sobic004G210700 Sobic004G210700 Sobic002G104200--Sobic004G210700 Sobic008G162700 Sobic008G162700 Sobic002G104200--Sobic008G162700 Sobic009G182900 Sobic009G182900 Sobic002G104200--Sobic009G182900 Sobic004G236100 Sobic004G236100 Sobic002G104200--Sobic004G236100 Sobic002G042000 Sobic002G042000 Sobic002G104200--Sobic002G042000 Sobic001G525200--Sobic003G145400 Sobic001G525200--Sobic002G104200 Sobic001G525200--Sobic004G236100 Sobic009G069800 Sobic009G069800 Sobic001G525200--Sobic009G069800 Sobic001G525200--Sobic008G162700 Sobic001G525200--Sobic002G042000 Sobic010G031100 Sobic010G031100 Sobic001G525200--Sobic010G031100 Sobic004G336500 Sobic004G336500 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic003G145400--Sobic001G525200 Sobic006G230700 Sobic006G230700 Sobic003G145400--Sobic006G230700 Sobic003G145400--Sobic009G069800 Sobic003G145400--Sobic010G031100 Sobic003G145400--Sobic008G162700 Sobic006G190500 Sobic006G190500 Sobic003G145400--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic003G145400--Sobic006G230800 Sobic003G145400--Sobic004G236100 Sobic003G145400--Sobic004G336500 Sobic010G198600 Sobic010G198600 Sobic001G280800--Sobic010G198600 Sobic001G280800--Sobic004G336500 Sobic001G279300 Sobic001G279300 Sobic001G280800--Sobic001G279300 Sobic001G280800--Sobic009G069800 Sobic004G004400 Sobic004G004400 Sobic001G280800--Sobic004G004400 Sobic010G225251 Sobic010G225251 Sobic001G280800--Sobic010G225251 Sobic009G145700 Sobic009G145700 Sobic001G280800--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic001G280800--Sobic008G066401 Sobic004G109900 Sobic004G109900 Sobic001G280800--Sobic004G109900 Sobic001G256200 Sobic001G256200 Sobic007G144501--Sobic001G256200 Sobic007G144501--Sobic002G042000 Sobic002G040900 Sobic002G040900 Sobic007G144501--Sobic002G040900 Sobic002G093700 Sobic002G093700 Sobic007G144501--Sobic002G093700 Sobic001G054500 Sobic001G054500 Sobic007G144501--Sobic001G054500 Sobic004G045400 Sobic004G045400 Sobic007G144501--Sobic004G045400 Sobic002G115025 Sobic002G115025 Sobic007G144501--Sobic002G115025 Sobic006G234900 Sobic006G234900 Sobic007G144501--Sobic006G234900 Sobic006G101300 Sobic006G101300 Sobic007G144501--Sobic006G101300 Sobic004G340200 Sobic004G340200 Sobic004G210700--Sobic004G340200 Sobic007G066900 Sobic007G066900 Sobic004G210700--Sobic007G066900 Sobic009G123400 Sobic009G123400 Sobic004G210700--Sobic009G123400 Sobic007G067608 Sobic007G067608 Sobic004G210700--Sobic007G067608 Sobic004G210700--Sobic010G031100 Sobic010G032000 Sobic010G032000 Sobic004G210700--Sobic010G032000 Sobic005G215601 Sobic005G215601 Sobic004G210700--Sobic005G215601 Sobic004G140850 Sobic004G140850 Sobic004G210700--Sobic004G140850 Sobic008G162700--Sobic001G525200 Sobic008G162700--Sobic003G145400 Sobic008G162700--Sobic004G336500 Sobic008G162700--Sobic010G198600 Sobic008G162700--Sobic010G031100 Sobic008G162700--Sobic010G225251 Sobic008G162700--Sobic009G069800 Sobic008G162700--Sobic001G280800 Sobic009G148100 Sobic009G148100 Sobic008G162700--Sobic009G148100 Sobic009G182900--Sobic001G525200 Sobic009G182900--Sobic003G145400 Sobic009G182900--Sobic002G104200 Sobic009G182900--Sobic006G230700 Sobic009G182900--Sobic002G115025 Sobic009G182900--Sobic002G042000 Sobic009G182900--Sobic001G054500 Sobic006G217900 Sobic006G217900 Sobic009G182900--Sobic006G217900 Sobic009G209500 Sobic009G209500 Sobic009G182900--Sobic009G209500 Sobic004G236100--Sobic004G336500 Sobic004G236100--Sobic009G069800 Sobic007G008100 Sobic007G008100 Sobic004G236100--Sobic007G008100 Sobic004G236100--Sobic001G054500 Sobic004G236100--Sobic002G042000 Sobic004G236100--Sobic001G525200 Sobic010G032100 Sobic010G032100 Sobic004G236100--Sobic010G032100 Sobic009G229000 Sobic009G229000 Sobic004G236100--Sobic009G229000 Sobic001G354200 Sobic001G354200 Sobic004G236100--Sobic001G354200 Sobic002G042000--Sobic007G008100 Sobic002G042000--Sobic001G054500 Sobic002G042000--Sobic002G040900 Sobic003G364300 Sobic003G364300 Sobic002G042000--Sobic003G364300 Sobic002G042000--Sobic009G069800 Sobic002G042000--Sobic001G256200 Sobic002G042000--Sobic006G101300 Sobic004G148100 Sobic004G148100 Sobic002G042000--Sobic004G148100 Sobic007G008000 Sobic007G008000 Sobic002G042000--Sobic007G008000
Octagon: transcription factors


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