Gene annotation
Transcriptome id Sobic.006G230700.1
Synonym Sb06g029850
Functional annotation wound induced protein, putative, expressed
UniProt C5YGQ1
Pfam PF12609
Panther DB PTHR33090 PTHR33090:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10270 : Wound-responsive family protein
RAP-DB (Rice) LOC_Os04g54230.1 : wound induced protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ84834 , KQJ84833
Barley HORVU2Hr1G108780.1 , HORVU2Hr1G116830.1 , HORVU2Hr1G108730.1 , HORVU2Hr1G116780.1 , HORVU2Hr1G116800.3 , HORVU2Hr1G116800.4
Wheat TraesCS2D02G532000
Populus -


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cDNA sequences
Sobic.006G230700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
2 Sobic.006G190500 expressed protein -
3 Sobic.003G145400 expressed protein -
4 Sobic.009G111200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
5 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
6 Sobic.010G220200 haloacid dehalogenase-like hydrolase domain-containing protein 3, putative, expressed -
7 Sobic.001G525200 expressed protein -
8 Sobic.005G010200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G077500 gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
10 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.003G327500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
12 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G261200 expressed protein -
14 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
15 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G234700 expressed protein -
17 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
18 Sobic.001G436800 expressed protein -
19 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
20 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase


Gene co-expression network
sample Sobic006G230700 Sobic006G230700 Sobic006G230800 Sobic006G230800 Sobic006G230700--Sobic006G230800 Sobic006G190500 Sobic006G190500 Sobic006G230700--Sobic006G190500 Sobic003G145400 Sobic003G145400 Sobic006G230700--Sobic003G145400 Sobic009G111200 Sobic009G111200 Sobic006G230700--Sobic009G111200 Sobic010G031100 Sobic010G031100 Sobic006G230700--Sobic010G031100 Sobic010G220200 Sobic010G220200 Sobic006G230700--Sobic010G220200 Sobic001G525200 Sobic001G525200 Sobic006G230700--Sobic001G525200 Sobic005G010200 Sobic005G010200 Sobic006G230700--Sobic005G010200 Sobic009G077500 Sobic009G077500 Sobic006G230700--Sobic009G077500 Sobic006G230800--Sobic006G190500 Sobic003G123600 Sobic003G123600 Sobic006G230800--Sobic003G123600 Sobic006G230800--Sobic010G031100 Sobic001G107800 Sobic001G107800 Sobic006G230800--Sobic001G107800 Sobic002G261200 Sobic002G261200 Sobic006G230800--Sobic002G261200 Sobic002G415600 Sobic002G415600 Sobic006G230800--Sobic002G415600 Sobic006G230600 Sobic006G230600 Sobic006G230800--Sobic006G230600 Sobic006G230800--Sobic009G111200 Sobic010G032100 Sobic010G032100 Sobic006G230800--Sobic010G032100 Sobic006G190500--Sobic006G230800 Sobic006G190500--Sobic003G123600 Sobic006G190100 Sobic006G190100 Sobic006G190500--Sobic006G190100 Sobic006G190500--Sobic002G415600 Sobic006G230900 Sobic006G230900 Sobic006G190500--Sobic006G230900 Sobic006G190500--Sobic009G111200 Sobic010G217800 Sobic010G217800 Sobic006G190500--Sobic010G217800 Sobic003G144700 Sobic003G144700 Sobic006G190500--Sobic003G144700 Sobic006G190500--Sobic010G220200 Sobic003G145400--Sobic001G525200 Sobic003G145400--Sobic006G230700 Sobic009G069800 Sobic009G069800 Sobic003G145400--Sobic009G069800 Sobic003G145400--Sobic010G031100 Sobic008G162700 Sobic008G162700 Sobic003G145400--Sobic008G162700 Sobic003G145400--Sobic006G190500 Sobic003G145400--Sobic006G230800 Sobic004G236100 Sobic004G236100 Sobic003G145400--Sobic004G236100 Sobic004G336500 Sobic004G336500 Sobic003G145400--Sobic004G336500 Sobic009G111200--Sobic006G190500 Sobic009G111200--Sobic002G415600 Sobic009G111200--Sobic006G230800 Sobic001G481600 Sobic001G481600 Sobic009G111200--Sobic001G481600 Sobic009G111200--Sobic003G123600 Sobic009G111200--Sobic005G010200 Sobic006G231200 Sobic006G231200 Sobic009G111200--Sobic006G231200 Sobic005G103500 Sobic005G103500 Sobic009G111200--Sobic005G103500 Sobic009G111200--Sobic010G217800 Sobic010G031100--Sobic010G032100 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic010G031100--Sobic006G230600 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic010G220200--Sobic010G217800 Sobic010G220200--Sobic005G010200 Sobic010G220200--Sobic002G415600 Sobic010G220200--Sobic006G190500 Sobic010G220200--Sobic006G230800 Sobic003G288600 Sobic003G288600 Sobic010G220200--Sobic003G288600 Sobic006G231100 Sobic006G231100 Sobic010G220200--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic010G220200--Sobic008G177800 Sobic010G220200--Sobic006G230900 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic001G525200--Sobic004G236100 Sobic001G525200--Sobic009G069800 Sobic001G525200--Sobic008G162700 Sobic002G042000 Sobic002G042000 Sobic001G525200--Sobic002G042000 Sobic001G525200--Sobic010G031100 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic005G010200--Sobic010G220200 Sobic001G483400 Sobic001G483400 Sobic005G010200--Sobic001G483400 Sobic005G010200--Sobic008G177800 Sobic005G010200--Sobic009G111200 Sobic005G010200--Sobic006G190500 Sobic005G010200--Sobic010G217800 Sobic005G010200--Sobic002G415600 Sobic009G066800 Sobic009G066800 Sobic005G010200--Sobic009G066800 Sobic009G129000 Sobic009G129000 Sobic005G010200--Sobic009G129000 Sobic003G313800 Sobic003G313800 Sobic009G077500--Sobic003G313800 Sobic009G077500--Sobic006G190500 Sobic009G077500--Sobic006G190100 Sobic003G142300 Sobic003G142300 Sobic009G077500--Sobic003G142300 Sobic004G004400 Sobic004G004400 Sobic009G077500--Sobic004G004400 Sobic009G077500--Sobic005G010200 Sobic001G513700 Sobic001G513700 Sobic009G077500--Sobic001G513700 Sobic002G036100 Sobic002G036100 Sobic009G077500--Sobic002G036100 Sobic009G077500--Sobic006G231100
Octagon: transcription factors


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