Gene annotation
Transcriptome id Sobic.008G162700.4,Sobic.008G162700.2,Sobic.008G162700.1,Sobic.008G162700.5,Sobic.008G162700.3
Synonym Sb08g020910, SMO1-2, SMO1, ATSMO1-2, ATSMO1
Functional annotation fatty acid hydroxylase, putative, expressed
UniProt A0A1Z5R752 , A0A1Z5R7K3 , C5YRI8 , A0A1Z5R715
Pfam PF04116
Panther DB PTHR11863 PTHR11863:SF51
NCBI CDD KOG0873; C-4 sterol methyl oxidase
KEGG Orthology K14423; plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G22756 : sterol C4-methyl oxidase 1-2
RAP-DB (Rice) LOC_Os10g39810.1 : fatty acid hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a025329
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525200 expressed protein -
2 Sobic.003G145400 expressed protein -
3 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
6 Sobic.010G225251 - -
7 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
8 Sobic.001G280800 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.002G104200 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase
11 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
12 Sobic.006G190500 expressed protein -
13 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
14 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
15 Sobic.006G230600 expressed protein -
16 Sobic.006G230700 wound induced protein, putative, expressed -
17 Sobic.001G279300 Up-reguralion under heat(PubMedID : 24916767)@VQ domain containing protein, putative, expressed -
18 Sobic.004G236100 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.006G046900 expressed protein -


Gene co-expression network
sample Sobic008G162700 Sobic008G162700 Sobic001G525200 Sobic001G525200 Sobic008G162700--Sobic001G525200 Sobic003G145400 Sobic003G145400 Sobic008G162700--Sobic003G145400 Sobic004G336500 Sobic004G336500 Sobic008G162700--Sobic004G336500 Sobic010G198600 Sobic010G198600 Sobic008G162700--Sobic010G198600 Sobic010G031100 Sobic010G031100 Sobic008G162700--Sobic010G031100 Sobic010G225251 Sobic010G225251 Sobic008G162700--Sobic010G225251 Sobic009G069800 Sobic009G069800 Sobic008G162700--Sobic009G069800 Sobic001G280800 Sobic001G280800 Sobic008G162700--Sobic001G280800 Sobic009G148100 Sobic009G148100 Sobic008G162700--Sobic009G148100 Sobic001G525200--Sobic003G145400 Sobic002G104200 Sobic002G104200 Sobic001G525200--Sobic002G104200 Sobic004G236100 Sobic004G236100 Sobic001G525200--Sobic004G236100 Sobic001G525200--Sobic009G069800 Sobic001G525200--Sobic008G162700 Sobic002G042000 Sobic002G042000 Sobic001G525200--Sobic002G042000 Sobic001G525200--Sobic010G031100 Sobic001G525200--Sobic004G336500 Sobic004G067600 Sobic004G067600 Sobic001G525200--Sobic004G067600 Sobic003G145400--Sobic001G525200 Sobic006G230700 Sobic006G230700 Sobic003G145400--Sobic006G230700 Sobic003G145400--Sobic009G069800 Sobic003G145400--Sobic010G031100 Sobic003G145400--Sobic008G162700 Sobic006G190500 Sobic006G190500 Sobic003G145400--Sobic006G190500 Sobic006G230800 Sobic006G230800 Sobic003G145400--Sobic006G230800 Sobic003G145400--Sobic004G236100 Sobic003G145400--Sobic004G336500 Sobic004G336500--Sobic009G069800 Sobic003G367200 Sobic003G367200 Sobic004G336500--Sobic003G367200 Sobic001G169500 Sobic001G169500 Sobic004G336500--Sobic001G169500 Sobic007G008100 Sobic007G008100 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600 Sobic010G198600--Sobic001G280800 Sobic010G198600--Sobic001G138600 Sobic010G198600--Sobic003G382800 Sobic010G198600--Sobic001G169500 Sobic010G198600--Sobic004G336500 Sobic006G190100 Sobic006G190100 Sobic010G198600--Sobic006G190100 Sobic002G261200 Sobic002G261200 Sobic010G198600--Sobic002G261200 Sobic003G432700 Sobic003G432700 Sobic010G198600--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic010G198600--Sobic009G184000 Sobic010G032100 Sobic010G032100 Sobic010G031100--Sobic010G032100 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic010G225251--Sobic001G112200 Sobic010G225251--Sobic004G336500 Sobic001G310600 Sobic001G310600 Sobic010G225251--Sobic001G310600 Sobic010G225251--Sobic009G069800 Sobic010G225251--Sobic001G138600 Sobic010G225251--Sobic009G184000 Sobic002G389400 Sobic002G389400 Sobic010G225251--Sobic002G389400 Sobic004G109900 Sobic004G109900 Sobic010G225251--Sobic004G109900 Sobic007G169700 Sobic007G169700 Sobic010G225251--Sobic007G169700 Sobic009G069800--Sobic004G336500 Sobic009G069800--Sobic007G008100 Sobic009G069800--Sobic010G225251 Sobic009G069800--Sobic002G042000 Sobic009G069800--Sobic001G280800 Sobic001G477600 Sobic001G477600 Sobic009G069800--Sobic001G477600 Sobic009G069800--Sobic004G236100 Sobic010G166500 Sobic010G166500 Sobic009G069800--Sobic010G166500 Sobic003G041600 Sobic003G041600 Sobic009G069800--Sobic003G041600 Sobic001G280800--Sobic010G198600 Sobic001G280800--Sobic004G336500 Sobic001G279300 Sobic001G279300 Sobic001G280800--Sobic001G279300 Sobic001G280800--Sobic009G069800 Sobic004G004400 Sobic004G004400 Sobic001G280800--Sobic004G004400 Sobic001G280800--Sobic010G225251 Sobic009G145700 Sobic009G145700 Sobic001G280800--Sobic009G145700 Sobic008G066401 Sobic008G066401 Sobic001G280800--Sobic008G066401 Sobic001G280800--Sobic004G109900 Sobic009G148100--Sobic006G190100 Sobic009G148100--Sobic010G198600 Sobic001G105900 Sobic001G105900 Sobic009G148100--Sobic001G105900 Sobic009G148100--Sobic006G190500 Sobic001G076100 Sobic001G076100 Sobic009G148100--Sobic001G076100 Sobic001G443800 Sobic001G443800 Sobic009G148100--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic009G148100--Sobic002G389000 Sobic004G088300 Sobic004G088300 Sobic009G148100--Sobic004G088300 Sobic002G291900 Sobic002G291900 Sobic009G148100--Sobic002G291900
Octagon: transcription factors


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