Gene annotation
Transcriptome id Sobic.003G021900.1
Synonym CYP710A1, Sb03g002060
Functional annotation cytochrome P450, putative, expressed
UniProt C5XL37
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF0
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K09832; sterol 22-desaturase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G34500 : cytochrome P450, family 710, subfamily A, polypeptide 1
RAP-DB (Rice) LOC_Os01g11340.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a022935
Brachypodium -
Barley HORVU3Hr1G028620.2 , HORVU3Hr1G028620.1
Wheat TraesCS5A02G557000
Populus -


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cDNA sequences
Sobic.003G021900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
2 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
4 Sobic.006G249300 expressed protein -
5 Sobic.002G215300 expressed protein -
6 Sobic.003G138300 expressed protein -
7 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
8 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
9 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
10 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
12 Sobic.006G046900 expressed protein -
13 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
14 Sobic.009G069800 Hexokinase-7(PubMedID : 26186930)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Hexokinase 1 HXK1 (Os)(PubMedID : 27208977)@hexokinase, putative, expressed K00844: hexokinase
15 Sobic.001G525200 expressed protein -
16 Sobic.005G155200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
17 Sobic.005G202400 integral membrane protein TIGR01569 containing protein, expressed -
18 Sobic.003G394400 ubiquitin family protein, putative, expressed -
19 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic003G021900 Sobic003G021900 Sobic010G031100 Sobic010G031100 Sobic003G021900--Sobic010G031100 Sobic009G148100 Sobic009G148100 Sobic003G021900--Sobic009G148100 Sobic010G032100 Sobic010G032100 Sobic003G021900--Sobic010G032100 Sobic006G249300 Sobic006G249300 Sobic003G021900--Sobic006G249300 Sobic002G215300 Sobic002G215300 Sobic003G021900--Sobic002G215300 Sobic003G138300 Sobic003G138300 Sobic003G021900--Sobic003G138300 Sobic001G309600 Sobic001G309600 Sobic003G021900--Sobic001G309600 Sobic002G323300 Sobic002G323300 Sobic003G021900--Sobic002G323300 Sobic004G336500 Sobic004G336500 Sobic003G021900--Sobic004G336500 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic001G149800 Sobic001G149800 Sobic010G031100--Sobic001G149800 Sobic010G031100--Sobic002G215300 Sobic006G032700 Sobic006G032700 Sobic010G031100--Sobic006G032700 Sobic006G230600 Sobic006G230600 Sobic010G031100--Sobic006G230600 Sobic002G261200 Sobic002G261200 Sobic010G031100--Sobic002G261200 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic006G190100 Sobic006G190100 Sobic009G148100--Sobic006G190100 Sobic010G198600 Sobic010G198600 Sobic009G148100--Sobic010G198600 Sobic001G105900 Sobic001G105900 Sobic009G148100--Sobic001G105900 Sobic006G190500 Sobic006G190500 Sobic009G148100--Sobic006G190500 Sobic001G076100 Sobic001G076100 Sobic009G148100--Sobic001G076100 Sobic001G443800 Sobic001G443800 Sobic009G148100--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic009G148100--Sobic002G389000 Sobic004G088300 Sobic004G088300 Sobic009G148100--Sobic004G088300 Sobic002G291900 Sobic002G291900 Sobic009G148100--Sobic002G291900 Sobic001G397200 Sobic001G397200 Sobic010G032100--Sobic001G397200 Sobic002G068600 Sobic002G068600 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic010G032100--Sobic001G309600 Sobic010G032100--Sobic006G032700 Sobic003G394400 Sobic003G394400 Sobic010G032100--Sobic003G394400 Sobic001G481500 Sobic001G481500 Sobic010G032100--Sobic001G481500 Sobic001G139100 Sobic001G139100 Sobic006G249300--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic006G249300--Sobic001G169500 Sobic004G100700 Sobic004G100700 Sobic006G249300--Sobic004G100700 Sobic008G186100 Sobic008G186100 Sobic006G249300--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic006G249300--Sobic005G011300 Sobic003G086600 Sobic003G086600 Sobic006G249300--Sobic003G086600 Sobic010G259600 Sobic010G259600 Sobic006G249300--Sobic010G259600 Sobic003G084400 Sobic003G084400 Sobic006G249300--Sobic003G084400 Sobic009G183400 Sobic009G183400 Sobic006G249300--Sobic009G183400 Sobic002G215300--Sobic010G031100 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic002G215300--Sobic001G149800 Sobic002G215300--Sobic010G032100 Sobic002G215300--Sobic006G032700 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic002G215300--Sobic003G394400 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic003G138300--Sobic010G031100 Sobic003G138300--Sobic001G149800 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic001G309600--Sobic010G032100 Sobic001G309600--Sobic006G032700 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic009G069800 Sobic009G069800 Sobic002G323300--Sobic009G069800 Sobic002G323300--Sobic004G336500 Sobic001G115300 Sobic001G115300 Sobic002G323300--Sobic001G115300 Sobic002G389400 Sobic002G389400 Sobic002G323300--Sobic002G389400 Sobic004G169300 Sobic004G169300 Sobic002G323300--Sobic004G169300 Sobic010G166500 Sobic010G166500 Sobic002G323300--Sobic010G166500 Sobic002G323300--Sobic003G367200 Sobic001G280800 Sobic001G280800 Sobic002G323300--Sobic001G280800 Sobic004G321300 Sobic004G321300 Sobic002G323300--Sobic004G321300 Sobic004G336500--Sobic009G069800 Sobic004G336500--Sobic003G367200 Sobic004G336500--Sobic001G169500 Sobic007G008100 Sobic007G008100 Sobic004G336500--Sobic007G008100 Sobic001G112200 Sobic001G112200 Sobic004G336500--Sobic001G112200 Sobic010G225251 Sobic010G225251 Sobic004G336500--Sobic010G225251 Sobic003G382800 Sobic003G382800 Sobic004G336500--Sobic003G382800 Sobic004G336500--Sobic001G280800 Sobic001G138600 Sobic001G138600 Sobic004G336500--Sobic001G138600
Octagon: transcription factors


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