Gene annotation
Transcriptome id Sobic.005G202400.1
Synonym Sb05g025810
Functional annotation integral membrane protein TIGR01569 containing protein, expressed
UniProt C5Y7C8
Pfam PF04535
Panther DB PTHR36488 PTHR36488:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15620 : Uncharacterised protein family (UPF0497)
RAP-DB (Rice) LOC_Os11g42960.1 : integral membrane protein TIGR01569 containing protein, expressed
MaizeGDB (Corn) Zm00025a029214
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G217800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
2 Sobic.006G249300 expressed protein -
3 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
4 Sobic.001G481500 - -
5 Sobic.010G015300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
6 Sobic.006G150700 DEF12 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.003G138300 expressed protein -
8 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
9 Sobic.001G139100 expressed protein -
10 Sobic.010G102500 expressed protein -
11 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.004G210700 ATOZI1, putative, expressed -
13 Sobic.003G021900 cytochrome P450, putative, expressed K09832: sterol 22-desaturase
14 Sobic.002G215300 expressed protein -
15 Sobic.003G060200 expressed protein -
16 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.001G039200 expressed protein -
18 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
19 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
20 Sobic.008G162700 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase


Gene co-expression network
sample Sobic005G202400 Sobic005G202400 Sobic004G217800 Sobic004G217800 Sobic005G202400--Sobic004G217800 Sobic006G249300 Sobic006G249300 Sobic005G202400--Sobic006G249300 Sobic001G309600 Sobic001G309600 Sobic005G202400--Sobic001G309600 Sobic001G481500 Sobic001G481500 Sobic005G202400--Sobic001G481500 Sobic010G015300 Sobic010G015300 Sobic005G202400--Sobic010G015300 Sobic006G150700 Sobic006G150700 Sobic005G202400--Sobic006G150700 Sobic003G138300 Sobic003G138300 Sobic005G202400--Sobic003G138300 Sobic005G063300 Sobic005G063300 Sobic005G202400--Sobic005G063300 Sobic001G139100 Sobic001G139100 Sobic005G202400--Sobic001G139100 Sobic004G217800--Sobic006G249300 Sobic001G449600 Sobic001G449600 Sobic004G217800--Sobic001G449600 Sobic009G016300 Sobic009G016300 Sobic004G217800--Sobic009G016300 Sobic003G255200 Sobic003G255200 Sobic004G217800--Sobic003G255200 Sobic007G057000 Sobic007G057000 Sobic004G217800--Sobic007G057000 Sobic010G136000 Sobic010G136000 Sobic004G217800--Sobic010G136000 Sobic009G183400 Sobic009G183400 Sobic004G217800--Sobic009G183400 Sobic003G062600 Sobic003G062600 Sobic004G217800--Sobic003G062600 Sobic001G476500 Sobic001G476500 Sobic004G217800--Sobic001G476500 Sobic006G249300--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic006G249300--Sobic001G169500 Sobic004G100700 Sobic004G100700 Sobic006G249300--Sobic004G100700 Sobic008G186100 Sobic008G186100 Sobic006G249300--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic006G249300--Sobic005G011300 Sobic003G086600 Sobic003G086600 Sobic006G249300--Sobic003G086600 Sobic010G259600 Sobic010G259600 Sobic006G249300--Sobic010G259600 Sobic003G084400 Sobic003G084400 Sobic006G249300--Sobic003G084400 Sobic006G249300--Sobic009G183400 Sobic001G397200 Sobic001G397200 Sobic001G309600--Sobic001G397200 Sobic001G309600--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic001G309600--Sobic010G032100 Sobic006G032700 Sobic006G032700 Sobic001G309600--Sobic006G032700 Sobic001G149800 Sobic001G149800 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic002G215300 Sobic002G215300 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic001G481500--Sobic001G309600 Sobic001G481500--Sobic006G032700 Sobic001G481500--Sobic001G397200 Sobic001G481500--Sobic010G032100 Sobic001G481500--Sobic001G149800 Sobic001G481500--Sobic003G138300 Sobic001G481500--Sobic003G086600 Sobic001G481500--Sobic002G215300 Sobic002G068600 Sobic002G068600 Sobic001G481500--Sobic002G068600 Sobic010G015300--Sobic001G481500 Sobic007G151600 Sobic007G151600 Sobic010G015300--Sobic007G151600 Sobic001G325000 Sobic001G325000 Sobic010G015300--Sobic001G325000 Sobic009G229000 Sobic009G229000 Sobic010G015300--Sobic009G229000 Sobic010G015300--Sobic006G249300 Sobic010G015300--Sobic005G063300 Sobic010G275100 Sobic010G275100 Sobic010G015300--Sobic010G275100 Sobic010G015300--Sobic001G397200 Sobic010G015300--Sobic001G309600 Sobic003G016100 Sobic003G016100 Sobic006G150700--Sobic003G016100 Sobic002G213600 Sobic002G213600 Sobic006G150700--Sobic002G213600 Sobic008G144600 Sobic008G144600 Sobic006G150700--Sobic008G144600 Sobic003G053300 Sobic003G053300 Sobic006G150700--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic006G150700--Sobic002G003800 Sobic003G316000 Sobic003G316000 Sobic006G150700--Sobic003G316000 Sobic010G212500 Sobic010G212500 Sobic006G150700--Sobic010G212500 Sobic006G150700--Sobic006G249300 Sobic009G035300 Sobic009G035300 Sobic006G150700--Sobic009G035300 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic010G031100 Sobic010G031100 Sobic003G138300--Sobic010G031100 Sobic003G138300--Sobic001G149800 Sobic007G005700 Sobic007G005700 Sobic005G063300--Sobic007G005700 Sobic003G155600 Sobic003G155600 Sobic005G063300--Sobic003G155600 Sobic005G063300--Sobic003G255200 Sobic005G063300--Sobic010G015300 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic001G139100--Sobic006G249300 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic001G139100--Sobic010G259600 Sobic003G319500 Sobic003G319500 Sobic001G139100--Sobic003G319500 Sobic004G046200 Sobic004G046200 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200
Octagon: transcription factors


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