Gene annotation
Transcriptome id Sobic.001G344800.1
Synonym
Functional annotation jacalin-like lectin domain containing protein, expressed
UniProt A0A1B6QMP2
Pfam PF01419
Panther DB PTHR23244 PTHR23244:SF320
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G73040 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os04g30040.2 : jacalin-like lectin domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G030210.2 , HORVU7Hr1G030210.1
Wheat TraesCS7B02G050700 , TraesCS7D02G149200 , TraesCS7A02G147400 , TraesCS4D02G006500 , TraesCS7B02G050800 , TraesCS4D02G006600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G344700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
2 Sobic.004G328601 - K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
3 Sobic.004G272700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
4 Sobic.001G502500 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
6 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
7 Sobic.010G074600 expressed protein -
8 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
9 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
10 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.006G201400 seed specific protein Bn15D1B, putative, expressed -
12 Sobic.005G155200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
13 Sobic.010G077250 - -
14 Sobic.001G345900 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.007G032700 - -
16 Sobic.010G106000 expressed protein -
17 Sobic.001G532300 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
19 Sobic.010G225001 - -
20 Sobic.004G047400 uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed K06041: kdsD, arabinose-5-phosphate isomerase


Gene co-expression network
sample Sobic001G344800 Sobic001G344800 Sobic001G344700 Sobic001G344700 Sobic001G344800--Sobic001G344700 Sobic004G328601 Sobic004G328601 Sobic001G344800--Sobic004G328601 Sobic004G272700 Sobic004G272700 Sobic001G344800--Sobic004G272700 Sobic001G502500 Sobic001G502500 Sobic001G344800--Sobic001G502500 Sobic001G170700 Sobic001G170700 Sobic001G344800--Sobic001G170700 Sobic002G338400 Sobic002G338400 Sobic001G344800--Sobic002G338400 Sobic010G074600 Sobic010G074600 Sobic001G344800--Sobic010G074600 Sobic001G035600 Sobic001G035600 Sobic001G344800--Sobic001G035600 Sobic002G073800 Sobic002G073800 Sobic001G344800--Sobic002G073800 Sobic001G344700--Sobic001G344800 Sobic001G012500 Sobic001G012500 Sobic001G344700--Sobic001G012500 Sobic001G344700--Sobic002G338400 Sobic001G344700--Sobic004G272700 Sobic001G344700--Sobic002G073800 Sobic001G344700--Sobic004G328601 Sobic004G099900 Sobic004G099900 Sobic001G344700--Sobic004G099900 Sobic005G063300 Sobic005G063300 Sobic001G344700--Sobic005G063300 Sobic005G155200 Sobic005G155200 Sobic001G344700--Sobic005G155200 Sobic004G328900 Sobic004G328900 Sobic004G328601--Sobic004G328900 Sobic004G328601--Sobic001G502500 Sobic001G345900 Sobic001G345900 Sobic004G328601--Sobic001G345900 Sobic007G181000 Sobic007G181000 Sobic004G328601--Sobic007G181000 Sobic001G379300 Sobic001G379300 Sobic004G328601--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic004G328601--Sobic001G255300 Sobic003G317800 Sobic003G317800 Sobic004G328601--Sobic003G317800 Sobic006G238100 Sobic006G238100 Sobic004G328601--Sobic006G238100 Sobic002G128600 Sobic002G128600 Sobic004G328601--Sobic002G128600 Sobic007G088000 Sobic007G088000 Sobic004G272700--Sobic007G088000 Sobic002G379600 Sobic002G379600 Sobic004G272700--Sobic002G379600 Sobic003G306100 Sobic003G306100 Sobic004G272700--Sobic003G306100 Sobic010G083500 Sobic010G083500 Sobic004G272700--Sobic010G083500 Sobic004G332900 Sobic004G332900 Sobic004G272700--Sobic004G332900 Sobic010G019900 Sobic010G019900 Sobic004G272700--Sobic010G019900 Sobic004G272700--Sobic001G344800 Sobic010G178200 Sobic010G178200 Sobic004G272700--Sobic010G178200 Sobic010G165500 Sobic010G165500 Sobic004G272700--Sobic010G165500 Sobic006G084500 Sobic006G084500 Sobic001G502500--Sobic006G084500 Sobic001G502500--Sobic004G328601 Sobic004G263000 Sobic004G263000 Sobic001G502500--Sobic004G263000 Sobic007G090424 Sobic007G090424 Sobic001G502500--Sobic007G090424 Sobic001G127700 Sobic001G127700 Sobic001G502500--Sobic001G127700 Sobic006G172700 Sobic006G172700 Sobic001G502500--Sobic006G172700 Sobic001G003600 Sobic001G003600 Sobic001G502500--Sobic001G003600 Sobic010G124200 Sobic010G124200 Sobic001G502500--Sobic010G124200 Sobic004G302000 Sobic004G302000 Sobic001G502500--Sobic004G302000 Sobic010G162400 Sobic010G162400 Sobic001G170700--Sobic010G162400 Sobic001G170700--Sobic002G073800 Sobic001G170700--Sobic010G074600 Sobic001G170700--Sobic005G155200 Sobic009G253300 Sobic009G253300 Sobic001G170700--Sobic009G253300 Sobic001G170700--Sobic001G502500 Sobic001G170700--Sobic004G328601 Sobic001G170700--Sobic001G012500 Sobic002G388700 Sobic002G388700 Sobic001G170700--Sobic002G388700 Sobic002G252000 Sobic002G252000 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G396400 Sobic002G396400 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200 Sobic005G099500 Sobic005G099500 Sobic010G074600--Sobic005G099500 Sobic001G012300 Sobic001G012300 Sobic010G074600--Sobic001G012300 Sobic001G012600 Sobic001G012600 Sobic010G074600--Sobic001G012600 Sobic006G210800 Sobic006G210800 Sobic010G074600--Sobic006G210800 Sobic001G012200 Sobic001G012200 Sobic010G074600--Sobic001G012200 Sobic010G074600--Sobic006G084500 Sobic005G168700 Sobic005G168700 Sobic010G074600--Sobic005G168700 Sobic010G074600--Sobic007G181000 Sobic009G180800 Sobic009G180800 Sobic010G074600--Sobic009G180800 Sobic001G012400 Sobic001G012400 Sobic001G035600--Sobic001G012400 Sobic001G035600--Sobic002G338400 Sobic004G282700 Sobic004G282700 Sobic001G035600--Sobic004G282700 Sobic001G035600--Sobic006G038200 Sobic001G035600--Sobic001G012500 Sobic001G035600--Sobic002G347300 Sobic009G240700 Sobic009G240700 Sobic001G035600--Sobic009G240700 Sobic003G170300 Sobic003G170300 Sobic001G035600--Sobic003G170300 Sobic003G216500 Sobic003G216500 Sobic001G035600--Sobic003G216500 Sobic010G018400 Sobic010G018400 Sobic002G073800--Sobic010G018400 Sobic009G212200 Sobic009G212200 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700
Octagon: transcription factors


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