Gene annotation
Transcriptome id Sobic.003G333800.1
Synonym ATCBR, CBR1, CBR, Sb03g037870
Functional annotation NADH-cytochrome b5 reductase, putative, expressed
UniProt C5XN69
Pfam PF00175 PF00970
Panther DB PTHR19370 PTHR19370:SF111
NCBI CDD KOG0534; NADH-cytochrome b-5 reductase
KEGG Orthology K00326; cytochrome-b5 reductase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G17770 : NADH:cytochrome B5 reductase 1
RAP-DB (Rice) LOC_Os01g59930.1 : NADH-cytochrome b5 reductase, putative, expressed
MaizeGDB (Corn) Zm00025a044055 , Zm00025a027109
Brachypodium KQK10294
Barley HORVU3Hr1G080010.2 , HORVU3Hr1G080010.3 , HORVU3Hr1G080010.1 , HORVU3Hr1G080010.4 , HORVU3Hr1G080010.5 , HORVU3Hr1G079960.8 , HORVU3Hr1G079960.6 , HORVU3Hr1G079960.7 , HORVU3Hr1G079960.4 , HORVU3Hr1G079960.5 , HORVU3Hr1G079960.2 , HORVU3Hr1G079960.3 , HORVU3Hr1G079960.1
Wheat TraesCS3D02G332300 , TraesCS3B02G370400 , TraesCS3A02G338700
Populus -


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cDNA sequences
Sobic.003G333800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G379600 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
2 Sobic.009G101700 40S ribosomal protein S7, putative, expressed K02993: RP-S7e, small subunit ribosomal protein S7e
3 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
4 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
5 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
6 Sobic.001G410200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsAPx1 - Cytosolic Ascorbate Peroxidase encoding gene 1-8, expressed K00434: L-ascorbate peroxidase
7 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
8 Sobic.009G144300 ribosomal protein L7Ae, putative, expressed K02951: RP-S12e, small subunit ribosomal protein S12e
9 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
10 Sobic.003G322300 expressed protein -
11 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
12 Sobic.003G096000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
13 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase
14 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
15 Sobic.003G410500 transaldolase, putative, expressed K00616: E2.2.1.2, talA, transaldolase
16 Sobic.007G220900 ribosomal L9, putative, expressed K02939: RP-L9, MRPL9, large subunit ribosomal protein L9
17 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
18 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
19 Sobic.001G040100 methylenetetrahydrofolate reductase, putative, expressed K00297: metF, methylenetetrahydrofolate reductase (NADPH)
20 Sobic.001G030300 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17778: mitochondrial import inner membrane translocase subunit TIM10


Gene co-expression network
sample Sobic003G333800 Sobic003G333800 Sobic002G379600 Sobic002G379600 Sobic003G333800--Sobic002G379600 Sobic009G101700 Sobic009G101700 Sobic003G333800--Sobic009G101700 Sobic004G342400 Sobic004G342400 Sobic003G333800--Sobic004G342400 Sobic009G179100 Sobic009G179100 Sobic003G333800--Sobic009G179100 Sobic002G101000 Sobic002G101000 Sobic003G333800--Sobic002G101000 Sobic001G410200 Sobic001G410200 Sobic003G333800--Sobic001G410200 Sobic010G264300 Sobic010G264300 Sobic003G333800--Sobic010G264300 Sobic009G144300 Sobic009G144300 Sobic003G333800--Sobic009G144300 Sobic001G370700 Sobic001G370700 Sobic003G333800--Sobic001G370700 Sobic002G379600--Sobic003G333800 Sobic002G379600--Sobic001G410200 Sobic003G410500 Sobic003G410500 Sobic002G379600--Sobic003G410500 Sobic002G128800 Sobic002G128800 Sobic002G379600--Sobic002G128800 Sobic001G459900 Sobic001G459900 Sobic002G379600--Sobic001G459900 Sobic002G379600--Sobic009G101700 Sobic001G040100 Sobic001G040100 Sobic002G379600--Sobic001G040100 Sobic010G023800 Sobic010G023800 Sobic002G379600--Sobic010G023800 Sobic002G379600--Sobic009G179100 Sobic009G101700--Sobic009G179100 Sobic005G050500 Sobic005G050500 Sobic009G101700--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic009G101700--Sobic001G334300 Sobic003G387900 Sobic003G387900 Sobic009G101700--Sobic003G387900 Sobic009G101700--Sobic004G342400 Sobic006G213000 Sobic006G213000 Sobic009G101700--Sobic006G213000 Sobic001G226500 Sobic001G226500 Sobic009G101700--Sobic001G226500 Sobic009G242400 Sobic009G242400 Sobic009G101700--Sobic009G242400 Sobic002G379500 Sobic002G379500 Sobic009G101700--Sobic002G379500 Sobic010G023900 Sobic010G023900 Sobic004G342400--Sobic010G023900 Sobic004G342400--Sobic009G179100 Sobic004G342400--Sobic001G334300 Sobic004G342400--Sobic009G144300 Sobic004G342400--Sobic009G101700 Sobic009G233400 Sobic009G233400 Sobic004G342400--Sobic009G233400 Sobic002G304900 Sobic002G304900 Sobic004G342400--Sobic002G304900 Sobic004G342400--Sobic003G387900 Sobic009G173500 Sobic009G173500 Sobic004G342400--Sobic009G173500 Sobic009G179100--Sobic002G304900 Sobic009G179100--Sobic009G101700 Sobic009G179100--Sobic004G342400 Sobic009G179100--Sobic001G334300 Sobic009G179100--Sobic005G050500 Sobic009G179100--Sobic009G233400 Sobic009G179100--Sobic003G387900 Sobic001G039400 Sobic001G039400 Sobic009G179100--Sobic001G039400 Sobic009G179100--Sobic009G173500 Sobic009G104100 Sobic009G104100 Sobic002G101000--Sobic009G104100 Sobic007G220900 Sobic007G220900 Sobic002G101000--Sobic007G220900 Sobic007G029400 Sobic007G029400 Sobic002G101000--Sobic007G029400 Sobic002G101000--Sobic009G179100 Sobic002G101000--Sobic005G050500 Sobic002G101000--Sobic009G101700 Sobic002G054000 Sobic002G054000 Sobic002G101000--Sobic002G054000 Sobic002G101000--Sobic004G342400 Sobic004G349700 Sobic004G349700 Sobic002G101000--Sobic004G349700 Sobic010G190300 Sobic010G190300 Sobic001G410200--Sobic010G190300 Sobic003G300900 Sobic003G300900 Sobic001G410200--Sobic003G300900 Sobic006G200000 Sobic006G200000 Sobic001G410200--Sobic006G200000 Sobic001G410200--Sobic007G029400 Sobic001G410200--Sobic003G410500 Sobic005G113300 Sobic005G113300 Sobic001G410200--Sobic005G113300 Sobic001G410200--Sobic003G333800 Sobic001G410200--Sobic002G379600 Sobic009G212400 Sobic009G212400 Sobic001G410200--Sobic009G212400 Sobic001G286200 Sobic001G286200 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic002G308300 Sobic002G308300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic002G356400 Sobic002G356400 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic009G144300--Sobic001G334300 Sobic001G085400 Sobic001G085400 Sobic009G144300--Sobic001G085400 Sobic009G227400 Sobic009G227400 Sobic009G144300--Sobic009G227400 Sobic009G144300--Sobic009G233400 Sobic009G144300--Sobic002G304900 Sobic009G144300--Sobic003G387900 Sobic006G216600 Sobic006G216600 Sobic009G144300--Sobic006G216600 Sobic002G049300 Sobic002G049300 Sobic009G144300--Sobic002G049300 Sobic002G255100 Sobic002G255100 Sobic009G144300--Sobic002G255100 Sobic001G370700--Sobic010G264300 Sobic002G309700 Sobic002G309700 Sobic001G370700--Sobic002G309700 Sobic001G370700--Sobic002G308300 Sobic001G370700--Sobic002G180300 Sobic001G370700--Sobic002G078300 Sobic001G347901 Sobic001G347901 Sobic001G370700--Sobic001G347901 Sobic003G261100 Sobic003G261100 Sobic001G370700--Sobic003G261100 Sobic001G370700--Sobic009G179100 Sobic004G260200 Sobic004G260200 Sobic001G370700--Sobic004G260200
Octagon: transcription factors


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