Gene annotation
Transcriptome id Sobic.004G059600.4,Sobic.004G059600.5,Sobic.004G059600.3,Sobic.004G059600.2
Synonym Sb04g005000
Functional annotation DUF581 domain containing protein, expressed
UniProt C5XW70 , A0A1Z5RLL0 , A0A1Z5RL39
Pfam PF04570
Panther DB PTHR33059:SF6 PTHR33059 PTHR33059 PTHR33059:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19200 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os02g07820.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a019129
Brachypodium KQJ93587
Barley -
Wheat TraesCS6A02G154700
Populus -


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cDNA sequences
Sobic.004G059600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G028300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
2 Sobic.004G323900 protein kinase, putative, expressed K09553: stress-induced-phosphoprotein 1
3 Sobic.004G106300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
4 Sobic.003G287450 - -
5 Sobic.010G115600 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
6 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
7 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
8 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
9 Sobic.007G192000 ACR5, putative, expressed -
10 Sobic.002G185600 transporter, putative, expressed -
11 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
12 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
13 Sobic.002G415000 POEI49 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
15 Sobic.008G079800 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
16 Sobic.003G157700 expressed protein -
17 Sobic.003G128800 expansin precursor, putative, expressed -
18 Sobic.004G121900 expansin precursor, putative, expressed -
19 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
20 Sobic.007G170300 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase


Gene co-expression network
sample Sobic004G059600 Sobic004G059600 Sobic003G028300 Sobic003G028300 Sobic004G059600--Sobic003G028300 Sobic004G323900 Sobic004G323900 Sobic004G059600--Sobic004G323900 Sobic004G106300 Sobic004G106300 Sobic004G059600--Sobic004G106300 Sobic003G287450 Sobic003G287450 Sobic004G059600--Sobic003G287450 Sobic010G115600 Sobic010G115600 Sobic004G059600--Sobic010G115600 Sobic001G263900 Sobic001G263900 Sobic004G059600--Sobic001G263900 Sobic006G028400 Sobic006G028400 Sobic004G059600--Sobic006G028400 Sobic003G203600 Sobic003G203600 Sobic004G059600--Sobic003G203600 Sobic007G192000 Sobic007G192000 Sobic004G059600--Sobic007G192000 Sobic007G170300 Sobic007G170300 Sobic003G028300--Sobic007G170300 Sobic006G135300 Sobic006G135300 Sobic003G028300--Sobic006G135300 Sobic006G229100 Sobic006G229100 Sobic003G028300--Sobic006G229100 Sobic003G015300 Sobic003G015300 Sobic003G028300--Sobic003G015300 Sobic002G101400 Sobic002G101400 Sobic003G028300--Sobic002G101400 Sobic010G082000 Sobic010G082000 Sobic003G028300--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic003G028300--Sobic006G092700 Sobic010G113100 Sobic010G113100 Sobic003G028300--Sobic010G113100 Sobic003G028300--Sobic003G203600 Sobic003G192600 Sobic003G192600 Sobic004G323900--Sobic003G192600 Sobic003G287400 Sobic003G287400 Sobic004G323900--Sobic003G287400 Sobic005G075400 Sobic005G075400 Sobic004G323900--Sobic005G075400 Sobic004G323900--Sobic003G287450 Sobic004G323900--Sobic004G059600 Sobic004G312500 Sobic004G312500 Sobic004G323900--Sobic004G312500 Sobic002G411000 Sobic002G411000 Sobic004G323900--Sobic002G411000 Sobic006G108300 Sobic006G108300 Sobic004G323900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic004G323900--Sobic006G009700 Sobic004G312200 Sobic004G312200 Sobic004G106300--Sobic004G312200 Sobic004G106300--Sobic010G082000 Sobic004G106300--Sobic003G203600 Sobic003G240400 Sobic003G240400 Sobic004G106300--Sobic003G240400 Sobic003G128800 Sobic003G128800 Sobic004G106300--Sobic003G128800 Sobic006G196400 Sobic006G196400 Sobic004G106300--Sobic006G196400 Sobic002G195600 Sobic002G195600 Sobic004G106300--Sobic002G195600 Sobic004G106300--Sobic006G092700 Sobic003G426500 Sobic003G426500 Sobic004G106300--Sobic003G426500 Sobic002G259100 Sobic002G259100 Sobic003G287450--Sobic002G259100 Sobic001G503000 Sobic001G503000 Sobic003G287450--Sobic001G503000 Sobic005G115300 Sobic005G115300 Sobic003G287450--Sobic005G115300 Sobic003G287450--Sobic004G312200 Sobic003G287450--Sobic006G009700 Sobic005G071900 Sobic005G071900 Sobic003G287450--Sobic005G071900 Sobic001G218500 Sobic001G218500 Sobic003G287450--Sobic001G218500 Sobic003G287450--Sobic004G312500 Sobic003G287450--Sobic003G287400 Sobic001G002800 Sobic001G002800 Sobic010G115600--Sobic001G002800 Sobic003G053500 Sobic003G053500 Sobic010G115600--Sobic003G053500 Sobic007G090472 Sobic007G090472 Sobic010G115600--Sobic007G090472 Sobic010G028100 Sobic010G028100 Sobic010G115600--Sobic010G028100 Sobic002G146000 Sobic002G146000 Sobic010G115600--Sobic002G146000 Sobic007G073000 Sobic007G073000 Sobic010G115600--Sobic007G073000 Sobic001G514700 Sobic001G514700 Sobic010G115600--Sobic001G514700 Sobic001G360500 Sobic001G360500 Sobic010G115600--Sobic001G360500 Sobic003G266300 Sobic003G266300 Sobic010G115600--Sobic003G266300 Sobic009G221900 Sobic009G221900 Sobic001G263900--Sobic009G221900 Sobic003G099166 Sobic003G099166 Sobic001G263900--Sobic003G099166 Sobic001G250100 Sobic001G250100 Sobic001G263900--Sobic001G250100 Sobic009G017500 Sobic009G017500 Sobic001G263900--Sobic009G017500 Sobic002G383900 Sobic002G383900 Sobic001G263900--Sobic002G383900 Sobic002G030800 Sobic002G030800 Sobic001G263900--Sobic002G030800 Sobic001G471800 Sobic001G471800 Sobic001G263900--Sobic001G471800 Sobic002G085800 Sobic002G085800 Sobic001G263900--Sobic002G085800 Sobic007G047300 Sobic007G047300 Sobic001G263900--Sobic007G047300 Sobic006G183900 Sobic006G183900 Sobic006G028400--Sobic006G183900 Sobic006G028400--Sobic003G203600 Sobic006G028400--Sobic007G170300 Sobic007G109600 Sobic007G109600 Sobic006G028400--Sobic007G109600 Sobic007G178900 Sobic007G178900 Sobic006G028400--Sobic007G178900 Sobic002G185800 Sobic002G185800 Sobic006G028400--Sobic002G185800 Sobic002G365500 Sobic002G365500 Sobic006G028400--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic006G028400--Sobic004G071000 Sobic002G365550 Sobic002G365550 Sobic006G028400--Sobic002G365550 Sobic001G067100 Sobic001G067100 Sobic003G203600--Sobic001G067100 Sobic003G203600--Sobic002G195600 Sobic003G203600--Sobic006G135300 Sobic003G203600--Sobic010G082000 Sobic003G203600--Sobic003G426500 Sobic003G203600--Sobic006G028400 Sobic003G203600--Sobic006G092700 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic003G185300 Sobic003G185300 Sobic007G192000--Sobic003G185300 Sobic009G259800 Sobic009G259800 Sobic007G192000--Sobic009G259800 Sobic002G003400 Sobic002G003400 Sobic007G192000--Sobic002G003400 Sobic007G192000--Sobic006G196400 Sobic005G080600 Sobic005G080600 Sobic007G192000--Sobic005G080600 Sobic007G020700 Sobic007G020700 Sobic007G192000--Sobic007G020700 Sobic003G426200 Sobic003G426200 Sobic007G192000--Sobic003G426200 Sobic009G058400 Sobic009G058400 Sobic007G192000--Sobic009G058400 Sobic004G008600 Sobic004G008600 Sobic007G192000--Sobic004G008600
Octagon: transcription factors


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