Gene annotation
Transcriptome id Sobic.003G236400.1
Synonym Sb03g029380
Functional annotation expressed protein
UniProt C5XF51
Pfam -
Panther DB PTHR33237 PTHR33237:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18560 : -
RAP-DB (Rice) LOC_Os02g48150.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G228700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
2 Sobic.001G163800 No apical meristem protein, putative, expressed -
3 Sobic.001G250100 thaumatin, putative, expressed -
4 Sobic.009G174300 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@WRKY84, expressed -
5 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.002G311501 - -
7 Sobic.007G159600 expressed protein -
8 Sobic.002G365550 - -
9 Sobic.002G357800 SHR, putative, expressed -
10 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
11 Sobic.002G365801 - -
12 Sobic.009G246100 X8 domain containing protein, expressed -
13 Sobic.005G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@cytokinin-O-glucosyltransferase 3, putative, expressed -
14 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
15 Sobic.001G059600 LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G322100 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
18 Sobic.007G007300 methyltransferase domain containing protein, expressed -
19 Sobic.008G138900 MLA12, putative, expressed -
20 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic003G236400 Sobic003G236400 Sobic003G228700 Sobic003G228700 Sobic003G236400--Sobic003G228700 Sobic001G163800 Sobic001G163800 Sobic003G236400--Sobic001G163800 Sobic001G250100 Sobic001G250100 Sobic003G236400--Sobic001G250100 Sobic009G174300 Sobic009G174300 Sobic003G236400--Sobic009G174300 Sobic005G177400 Sobic005G177400 Sobic003G236400--Sobic005G177400 Sobic002G311501 Sobic002G311501 Sobic003G236400--Sobic002G311501 Sobic007G159600 Sobic007G159600 Sobic003G236400--Sobic007G159600 Sobic002G365550 Sobic002G365550 Sobic003G236400--Sobic002G365550 Sobic002G357800 Sobic002G357800 Sobic003G236400--Sobic002G357800 Sobic003G322100 Sobic003G322100 Sobic003G228700--Sobic003G322100 Sobic003G228700--Sobic002G365550 Sobic007G015200 Sobic007G015200 Sobic003G228700--Sobic007G015200 Sobic003G228700--Sobic005G177400 Sobic007G073000 Sobic007G073000 Sobic003G228700--Sobic007G073000 Sobic001G379400 Sobic001G379400 Sobic003G228700--Sobic001G379400 Sobic001G455100 Sobic001G455100 Sobic003G228700--Sobic001G455100 Sobic002G404100 Sobic002G404100 Sobic003G228700--Sobic002G404100 Sobic002G365801 Sobic002G365801 Sobic003G228700--Sobic002G365801 Sobic005G022500 Sobic005G022500 Sobic001G163800--Sobic005G022500 Sobic004G193500 Sobic004G193500 Sobic001G163800--Sobic004G193500 Sobic001G163800--Sobic001G250100 Sobic003G287200 Sobic003G287200 Sobic001G163800--Sobic003G287200 Sobic008G133000 Sobic008G133000 Sobic001G163800--Sobic008G133000 Sobic001G002800 Sobic001G002800 Sobic001G163800--Sobic001G002800 Sobic001G503000 Sobic001G503000 Sobic001G163800--Sobic001G503000 Sobic001G471800 Sobic001G471800 Sobic001G163800--Sobic001G471800 Sobic009G250100 Sobic009G250100 Sobic001G163800--Sobic009G250100 Sobic001G059600 Sobic001G059600 Sobic001G250100--Sobic001G059600 Sobic006G160900 Sobic006G160900 Sobic001G250100--Sobic006G160900 Sobic001G250100--Sobic001G471800 Sobic009G008800 Sobic009G008800 Sobic001G250100--Sobic009G008800 Sobic002G030800 Sobic002G030800 Sobic001G250100--Sobic002G030800 Sobic010G014400 Sobic010G014400 Sobic001G250100--Sobic010G014400 Sobic003G183300 Sobic003G183300 Sobic001G250100--Sobic003G183300 Sobic001G250100--Sobic001G163800 Sobic001G250100--Sobic004G193500 Sobic005G197400 Sobic005G197400 Sobic009G174300--Sobic005G197400 Sobic004G009200 Sobic004G009200 Sobic009G174300--Sobic004G009200 Sobic005G182800 Sobic005G182800 Sobic009G174300--Sobic005G182800 Sobic005G182900 Sobic005G182900 Sobic009G174300--Sobic005G182900 Sobic005G197500 Sobic005G197500 Sobic009G174300--Sobic005G197500 Sobic005G216600 Sobic005G216600 Sobic009G174300--Sobic005G216600 Sobic003G382200 Sobic003G382200 Sobic009G174300--Sobic003G382200 Sobic004G308500 Sobic004G308500 Sobic009G174300--Sobic004G308500 Sobic001G271300 Sobic001G271300 Sobic009G174300--Sobic001G271300 Sobic005G177400--Sobic003G322100 Sobic005G177400--Sobic007G073000 Sobic005G177400--Sobic001G503000 Sobic005G177400--Sobic004G193500 Sobic001G274400 Sobic001G274400 Sobic005G177400--Sobic001G274400 Sobic010G082000 Sobic010G082000 Sobic005G177400--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic005G177400--Sobic001G360500 Sobic010G096700 Sobic010G096700 Sobic005G177400--Sobic010G096700 Sobic006G092700 Sobic006G092700 Sobic005G177400--Sobic006G092700 Sobic002G311501--Sobic002G365550 Sobic002G311501--Sobic002G365801 Sobic003G368100 Sobic003G368100 Sobic002G311501--Sobic003G368100 Sobic001G059500 Sobic001G059500 Sobic002G311501--Sobic001G059500 Sobic001G068500 Sobic001G068500 Sobic002G311501--Sobic001G068500 Sobic004G165300 Sobic004G165300 Sobic002G311501--Sobic004G165300 Sobic010G096400 Sobic010G096400 Sobic002G311501--Sobic010G096400 Sobic005G160700 Sobic005G160700 Sobic002G311501--Sobic005G160700 Sobic002G311501--Sobic001G059600 Sobic001G144800 Sobic001G144800 Sobic007G159600--Sobic001G144800 Sobic007G159600--Sobic002G311501 Sobic003G341500 Sobic003G341500 Sobic007G159600--Sobic003G341500 Sobic007G159600--Sobic001G068500 Sobic007G159600--Sobic003G368100 Sobic002G050100 Sobic002G050100 Sobic007G159600--Sobic002G050100 Sobic007G159600--Sobic003G236400 Sobic007G159450 Sobic007G159450 Sobic007G159600--Sobic007G159450 Sobic007G159600--Sobic001G059500 Sobic002G365550--Sobic002G365801 Sobic002G365600 Sobic002G365600 Sobic002G365550--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic002G365550--Sobic002G365500 Sobic004G071000 Sobic004G071000 Sobic002G365550--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365550--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic002G365550--Sobic010G212500 Sobic002G365550--Sobic010G096400 Sobic002G368300 Sobic002G368300 Sobic002G365550--Sobic002G368300 Sobic003G053400 Sobic003G053400 Sobic002G365550--Sobic003G053400 Sobic007G154200 Sobic007G154200 Sobic002G357800--Sobic007G154200 Sobic006G003100 Sobic006G003100 Sobic002G357800--Sobic006G003100 Sobic003G020200 Sobic003G020200 Sobic002G357800--Sobic003G020200 Sobic003G236600 Sobic003G236600 Sobic002G357800--Sobic003G236600 Sobic002G357800--Sobic001G455100 Sobic006G201000 Sobic006G201000 Sobic002G357800--Sobic006G201000 Sobic001G314000 Sobic001G314000 Sobic002G357800--Sobic001G314000 Sobic009G074500 Sobic009G074500 Sobic002G357800--Sobic009G074500 Sobic008G157000 Sobic008G157000 Sobic002G357800--Sobic008G157000
Octagon: transcription factors


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