Gene annotation
Transcriptome id Sobic.006G069500.1
Synonym Sb06g015610
Functional annotation glutaredoxin, putative, expressed
UniProt C5YFV5
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT5G03870 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os04g33680.1 : glutaredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a011511
Brachypodium KQJ82516 , KQK05802 , KQJ93507 , KQK06797
Barley HORVU2Hr1G073040.1 , HORVU1Hr1G070570.1 , HORVU1Hr1G070570.2
Wheat TraesCS3D02G343100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G511200 expressed protein -
2 Sobic.003G273800 IQ calmodulin-binding motif domain containing protein, expressed -
3 Sobic.004G180400 remorin family protein, putative, expressed -
4 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
5 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
6 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
7 Sobic.002G237700 expressed protein -
8 Sobic.003G364700 expressed protein -
9 Sobic.009G233500 expressed protein -
10 Sobic.009G229100 expressed protein -
11 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
13 Sobic.005G016300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G127200 expressed protein -
15 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
16 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
17 Sobic.001G075400 expressed protein -
18 Sobic.001G399400 calmodulin binding protein, putative, expressed -
19 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.010G271000 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G069500 Sobic006G069500 Sobic001G511200 Sobic001G511200 Sobic006G069500--Sobic001G511200 Sobic003G273800 Sobic003G273800 Sobic006G069500--Sobic003G273800 Sobic004G180400 Sobic004G180400 Sobic006G069500--Sobic004G180400 Sobic004G077100 Sobic004G077100 Sobic006G069500--Sobic004G077100 Sobic009G178900 Sobic009G178900 Sobic006G069500--Sobic009G178900 Sobic005G188400 Sobic005G188400 Sobic006G069500--Sobic005G188400 Sobic002G237700 Sobic002G237700 Sobic006G069500--Sobic002G237700 Sobic003G364700 Sobic003G364700 Sobic006G069500--Sobic003G364700 Sobic009G233500 Sobic009G233500 Sobic006G069500--Sobic009G233500 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic009G229100 Sobic009G229100 Sobic001G511200--Sobic009G229100 Sobic001G511200--Sobic003G273800 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic001G511200--Sobic009G233600 Sobic008G127200 Sobic008G127200 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic003G273800--Sobic006G069500 Sobic003G273800--Sobic002G237700 Sobic003G273800--Sobic001G511200 Sobic003G273800--Sobic009G178900 Sobic003G273800--Sobic009G233600 Sobic003G273800--Sobic004G077100 Sobic003G273800--Sobic004G180400 Sobic003G273800--Sobic005G188400 Sobic001G059900 Sobic001G059900 Sobic003G273800--Sobic001G059900 Sobic004G180400--Sobic006G069500 Sobic004G180400--Sobic009G233500 Sobic004G180400--Sobic004G077100 Sobic004G180400--Sobic001G511200 Sobic004G180400--Sobic003G273800 Sobic004G180400--Sobic009G178900 Sobic001G533200 Sobic001G533200 Sobic004G180400--Sobic001G533200 Sobic001G075400 Sobic001G075400 Sobic004G180400--Sobic001G075400 Sobic005G210600 Sobic005G210600 Sobic004G180400--Sobic005G210600 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic004G077100--Sobic006G069500 Sobic004G077100--Sobic004G180400 Sobic003G041700 Sobic003G041700 Sobic004G077100--Sobic003G041700 Sobic005G016300 Sobic005G016300 Sobic004G077100--Sobic005G016300 Sobic004G077100--Sobic003G273800 Sobic010G104400 Sobic010G104400 Sobic004G077100--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic004G077100--Sobic006G214000 Sobic009G178900--Sobic001G511200 Sobic009G178900--Sobic006G069500 Sobic009G178900--Sobic003G273800 Sobic009G178900--Sobic004G180400 Sobic009G178900--Sobic003G364700 Sobic009G178900--Sobic009G233600 Sobic009G178900--Sobic004G077100 Sobic009G178900--Sobic005G016300 Sobic006G271100 Sobic006G271100 Sobic009G178900--Sobic006G271100 Sobic005G188400--Sobic006G069500 Sobic005G188400--Sobic003G364700 Sobic005G188400--Sobic003G273800 Sobic005G188400--Sobic008G127200 Sobic005G188400--Sobic009G233600 Sobic005G188400--Sobic001G511200 Sobic002G219500 Sobic002G219500 Sobic005G188400--Sobic002G219500 Sobic005G188400--Sobic004G180400 Sobic005G188400--Sobic002G237700 Sobic002G237700--Sobic003G273800 Sobic002G237700--Sobic009G233600 Sobic002G237700--Sobic006G069500 Sobic002G237700--Sobic001G511200 Sobic006G240300 Sobic006G240300 Sobic002G237700--Sobic006G240300 Sobic002G237700--Sobic005G188400 Sobic002G237700--Sobic002G356700 Sobic002G237700--Sobic004G180400 Sobic002G237700--Sobic009G229100 Sobic003G364700--Sobic009G229100 Sobic003G364700--Sobic001G511200 Sobic003G364700--Sobic002G356700 Sobic007G051501 Sobic007G051501 Sobic003G364700--Sobic007G051501 Sobic003G364700--Sobic009G233600 Sobic005G022400 Sobic005G022400 Sobic003G364700--Sobic005G022400 Sobic003G423100 Sobic003G423100 Sobic003G364700--Sobic003G423100 Sobic003G178200 Sobic003G178200 Sobic003G364700--Sobic003G178200 Sobic009G070000 Sobic009G070000 Sobic003G364700--Sobic009G070000 Sobic009G233500--Sobic004G077100 Sobic009G233500--Sobic004G180400 Sobic009G233500--Sobic001G075400 Sobic007G207700 Sobic007G207700 Sobic009G233500--Sobic007G207700 Sobic009G233500--Sobic006G069500 Sobic009G233500--Sobic005G016300 Sobic003G328500 Sobic003G328500 Sobic009G233500--Sobic003G328500 Sobic007G197700 Sobic007G197700 Sobic009G233500--Sobic007G197700 Sobic009G233500--Sobic001G533200
Octagon: transcription factors


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