Gene annotation
Transcriptome id Sobic.006G271100.1
Synonym Sb06g033250
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5YAM3
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24318 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os11g47820.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a009254
Brachypodium KQJ85345
Barley HORVU2Hr1G102010.2 , HORVU2Hr1G102010.1 , HORVU1Hr1G011260.1 , HORVU1Hr1G011210.1 , HORVU1Hr1G011260.2 , HORVU2Hr1G102020.1 , HORVU1Hr1G011100.1 , HORVU1Hr1G011100.2 , HORVU0Hr1G031910.1 , HORVU1Hr1G010910.2 , HORVU1Hr1G010910.3
Wheat TraesCS1D02G056500 , TraesCS1B02G072500 , TraesCS2D02G436800 , TraesCS2B02G459400 , TraesCS2A02G439500 , TraesCS3D02G478900 , TraesCS3B02G530600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
2 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
3 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
4 Sobic.001G399400 calmodulin binding protein, putative, expressed -
5 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G511200 expressed protein -
7 Sobic.003G184500 carboxyl-terminal peptidase, putative, expressed -
8 Sobic.009G229100 expressed protein -
9 Sobic.002G219500 ATPase, putative, expressed -
10 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
11 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
12 Sobic.003G364700 expressed protein -
13 Sobic.006G069500 glutaredoxin, putative, expressed -
14 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.008G127200 expressed protein -
16 Sobic.002G004500 expressed protein -
17 Sobic.003G399400 expressed protein -
18 Sobic.007G017900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
19 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.001G530300 HOTHEAD precursor, putative, expressed -


Gene co-expression network
sample Sobic006G271100 Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic006G271100--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic006G271100--Sobic003G047300 Sobic006G228100 Sobic006G228100 Sobic006G271100--Sobic006G228100 Sobic001G399400 Sobic001G399400 Sobic006G271100--Sobic001G399400 Sobic004G049800 Sobic004G049800 Sobic006G271100--Sobic004G049800 Sobic001G511200 Sobic001G511200 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic009G229100 Sobic009G229100 Sobic006G271100--Sobic009G229100 Sobic002G219500 Sobic002G219500 Sobic006G271100--Sobic002G219500 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic005G111600 Sobic005G111600 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic009G070000--Sobic001G511200 Sobic003G047300--Sobic009G070000 Sobic003G047300--Sobic006G271100 Sobic003G047300--Sobic001G049000 Sobic004G296100 Sobic004G296100 Sobic003G047300--Sobic004G296100 Sobic003G047300--Sobic005G111600 Sobic003G047300--Sobic003G364700 Sobic010G145200 Sobic010G145200 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic003G047300--Sobic004G049800 Sobic001G530300 Sobic001G530300 Sobic006G228100--Sobic001G530300 Sobic004G225400 Sobic004G225400 Sobic006G228100--Sobic004G225400 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic006G228100--Sobic005G111600 Sobic002G004500 Sobic002G004500 Sobic006G228100--Sobic002G004500 Sobic010G246500 Sobic010G246500 Sobic006G228100--Sobic010G246500 Sobic006G228100--Sobic001G399400 Sobic008G137500 Sobic008G137500 Sobic006G228100--Sobic008G137500 Sobic001G399400--Sobic002G219500 Sobic001G399400--Sobic006G271100 Sobic001G399400--Sobic003G184500 Sobic001G399400--Sobic009G070000 Sobic001G399400--Sobic006G228100 Sobic003G399400 Sobic003G399400 Sobic001G399400--Sobic003G399400 Sobic001G399400--Sobic002G004500 Sobic005G188400 Sobic005G188400 Sobic001G399400--Sobic005G188400 Sobic004G077100 Sobic004G077100 Sobic001G399400--Sobic004G077100 Sobic004G049800--Sobic004G296100 Sobic004G049800--Sobic006G271100 Sobic004G049800--Sobic009G070000 Sobic004G049800--Sobic003G047300 Sobic001G430000 Sobic001G430000 Sobic004G049800--Sobic001G430000 Sobic004G049800--Sobic001G511200 Sobic003G023666 Sobic003G023666 Sobic004G049800--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic004G049800--Sobic008G127200 Sobic004G049800--Sobic003G364700 Sobic006G069500 Sobic006G069500 Sobic001G511200--Sobic006G069500 Sobic001G511200--Sobic003G364700 Sobic001G511200--Sobic009G229100 Sobic003G273800 Sobic003G273800 Sobic001G511200--Sobic003G273800 Sobic009G178900 Sobic009G178900 Sobic001G511200--Sobic009G178900 Sobic002G356700 Sobic002G356700 Sobic001G511200--Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic001G511200--Sobic009G233600 Sobic001G511200--Sobic008G127200 Sobic003G201300 Sobic003G201300 Sobic001G511200--Sobic003G201300 Sobic003G184500--Sobic001G430000 Sobic003G184500--Sobic001G399400 Sobic008G107600 Sobic008G107600 Sobic003G184500--Sobic008G107600 Sobic003G184500--Sobic006G271100 Sobic002G359800 Sobic002G359800 Sobic003G184500--Sobic002G359800 Sobic002G184800 Sobic002G184800 Sobic003G184500--Sobic002G184800 Sobic003G184500--Sobic003G399400 Sobic003G184500--Sobic002G219500 Sobic003G184500--Sobic003G023666 Sobic009G229100--Sobic003G364700 Sobic009G229100--Sobic009G233600 Sobic009G229100--Sobic002G356700 Sobic001G527500 Sobic001G527500 Sobic009G229100--Sobic001G527500 Sobic003G178200 Sobic003G178200 Sobic009G229100--Sobic003G178200 Sobic007G017900 Sobic007G017900 Sobic009G229100--Sobic007G017900 Sobic003G245700 Sobic003G245700 Sobic009G229100--Sobic003G245700 Sobic009G229100--Sobic001G511200 Sobic003G423100 Sobic003G423100 Sobic009G229100--Sobic003G423100 Sobic002G219500--Sobic001G399400 Sobic002G219500--Sobic003G399400 Sobic002G219500--Sobic006G271100 Sobic002G219500--Sobic004G225400 Sobic002G219500--Sobic005G188400 Sobic002G219500--Sobic003G184500 Sobic002G219500--Sobic006G228100 Sobic002G219500--Sobic002G004500 Sobic009G159600 Sobic009G159600 Sobic002G219500--Sobic009G159600
Octagon: transcription factors


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