Gene annotation
Transcriptome id Sobic.004G225400.1
Synonym Sb04g026970, TCP-like gene;SbTCP11;SbTCP11
Functional annotation PCF-like (ClassI) Subclade 2 TCP (PubMedID : 21444336)
"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)." (PubMedID : 27917941)
"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)" (PubMedID : 28383054)
TCP family transcription factor, putative, expressed
UniProt C5XY73
Pfam PF03634
Panther DB PTHR31072 PTHR31072:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23280 : TCP family transcription factor
RAP-DB (Rice) LOC_Os02g42380.1 : TCP family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a021020 , Zm00025a056544 , Zm00025a044209 , Zm00025a032088
Brachypodium KQK00474 , KQJ83685 , KQK12863 , PNT69714
Barley HORVU1Hr1G077080.1 , HORVU1Hr1G077080.2 , HORVU2Hr1G090640.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.001G530300 HOTHEAD precursor, putative, expressed -
3 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
5 Sobic.002G219500 ATPase, putative, expressed -
6 Sobic.007G017900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
7 Sobic.002G004500 expressed protein -
8 Sobic.001G399400 calmodulin binding protein, putative, expressed -
9 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
10 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G399400 expressed protein -
12 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
13 Sobic.003G349800 domain of unknown function DUF966 domain containing protein, expressed -
14 Sobic.009G229100 expressed protein -
15 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.003G239600 chloroplast unusual positioning protein, putative, expressed -
17 Sobic.009G159600 ATROPGEF7/ROPGEF7, putative, expressed -
18 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.010G136500 expressed protein -
20 Sobic.006G108700 atypical receptor-like kinase MARK, putative, expressed -


Gene co-expression network
sample Sobic004G225400 Sobic004G225400 Sobic006G228100 Sobic006G228100 Sobic004G225400--Sobic006G228100 Sobic001G530300 Sobic001G530300 Sobic004G225400--Sobic001G530300 Sobic006G271100 Sobic006G271100 Sobic004G225400--Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic004G225400--Sobic009G070000 Sobic002G219500 Sobic002G219500 Sobic004G225400--Sobic002G219500 Sobic007G017900 Sobic007G017900 Sobic004G225400--Sobic007G017900 Sobic002G004500 Sobic002G004500 Sobic004G225400--Sobic002G004500 Sobic001G399400 Sobic001G399400 Sobic004G225400--Sobic001G399400 Sobic005G111600 Sobic005G111600 Sobic004G225400--Sobic005G111600 Sobic006G228100--Sobic001G530300 Sobic006G228100--Sobic004G225400 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic006G228100--Sobic005G111600 Sobic006G228100--Sobic002G004500 Sobic010G246500 Sobic010G246500 Sobic006G228100--Sobic010G246500 Sobic006G228100--Sobic001G399400 Sobic008G137500 Sobic008G137500 Sobic006G228100--Sobic008G137500 Sobic001G530300--Sobic006G228100 Sobic001G530300--Sobic004G225400 Sobic001G530300--Sobic007G017900 Sobic001G530300--Sobic006G271100 Sobic001G530300--Sobic010G246500 Sobic001G530300--Sobic009G070000 Sobic001G530300--Sobic002G004500 Sobic007G153400 Sobic007G153400 Sobic001G530300--Sobic007G153400 Sobic009G229100 Sobic009G229100 Sobic001G530300--Sobic009G229100 Sobic006G271100--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic006G271100--Sobic001G399400 Sobic004G049800 Sobic004G049800 Sobic006G271100--Sobic004G049800 Sobic001G511200 Sobic001G511200 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic006G271100--Sobic002G219500 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic009G070000--Sobic001G511200 Sobic002G219500--Sobic001G399400 Sobic003G399400 Sobic003G399400 Sobic002G219500--Sobic003G399400 Sobic002G219500--Sobic006G271100 Sobic002G219500--Sobic004G225400 Sobic005G188400 Sobic005G188400 Sobic002G219500--Sobic005G188400 Sobic002G219500--Sobic003G184500 Sobic002G219500--Sobic006G228100 Sobic002G219500--Sobic002G004500 Sobic009G159600 Sobic009G159600 Sobic002G219500--Sobic009G159600 Sobic003G178200 Sobic003G178200 Sobic007G017900--Sobic003G178200 Sobic007G017900--Sobic009G229100 Sobic010G145200 Sobic010G145200 Sobic007G017900--Sobic010G145200 Sobic003G245700 Sobic003G245700 Sobic007G017900--Sobic003G245700 Sobic007G072901 Sobic007G072901 Sobic007G017900--Sobic007G072901 Sobic005G022400 Sobic005G022400 Sobic007G017900--Sobic005G022400 Sobic001G527500 Sobic001G527500 Sobic007G017900--Sobic001G527500 Sobic005G189400 Sobic005G189400 Sobic007G017900--Sobic005G189400 Sobic007G017900--Sobic003G364700 Sobic002G004500--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic002G004500--Sobic006G108700 Sobic002G004500--Sobic006G228100 Sobic002G004500--Sobic006G271100 Sobic002G004500--Sobic001G399400 Sobic002G004500--Sobic002G219500 Sobic002G004500--Sobic004G225400 Sobic002G004500--Sobic003G184500 Sobic002G004500--Sobic001G530300 Sobic001G399400--Sobic002G219500 Sobic001G399400--Sobic006G271100 Sobic001G399400--Sobic003G184500 Sobic001G399400--Sobic009G070000 Sobic001G399400--Sobic006G228100 Sobic001G399400--Sobic003G399400 Sobic001G399400--Sobic002G004500 Sobic001G399400--Sobic005G188400 Sobic004G077100 Sobic004G077100 Sobic001G399400--Sobic004G077100 Sobic005G111600--Sobic009G070000 Sobic005G111600--Sobic008G137500 Sobic005G111600--Sobic003G047300 Sobic005G111600--Sobic006G271100 Sobic005G111600--Sobic009G229100 Sobic005G111600--Sobic006G228100 Sobic002G408500 Sobic002G408500 Sobic005G111600--Sobic002G408500 Sobic002G206400 Sobic002G206400 Sobic005G111600--Sobic002G206400 Sobic004G296100 Sobic004G296100 Sobic005G111600--Sobic004G296100
Octagon: transcription factors


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