Gene annotation
Transcriptome id Sobic.010G136500.1
Synonym Sb10g013280
Functional annotation expressed protein
UniProt C5Z2A6
Pfam -
Panther DB PTHR34056 PTHR34056:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18050 : -
RAP-DB (Rice) LOC_Os06g30210.1 : expressed protein
MaizeGDB (Corn) Zm00025a050682
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
4 Sobic.003G301200 expressed protein -
5 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
6 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
8 Sobic.010G191100 helix-loop-helix DNA-binding, putative, expressed -
9 Sobic.004G155900 heavy metal-associated domain containing protein, expressed -
10 Sobic.003G021800 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed -
11 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
13 Sobic.007G068500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
14 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
15 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
16 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.003G235800 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
18 Sobic.001G230400 pectate lyase precursor, putative, expressed K01728: pectate lyase
19 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
20 Sobic.007G081300 peptide transporter PTR2, putative, expressed -


Gene co-expression network
sample Sobic010G136500 Sobic010G136500 Sobic008G137500 Sobic008G137500 Sobic010G136500--Sobic008G137500 Sobic006G228100 Sobic006G228100 Sobic010G136500--Sobic006G228100 Sobic010G246500 Sobic010G246500 Sobic010G136500--Sobic010G246500 Sobic003G301200 Sobic003G301200 Sobic010G136500--Sobic003G301200 Sobic004G225400 Sobic004G225400 Sobic010G136500--Sobic004G225400 Sobic006G163600 Sobic006G163600 Sobic010G136500--Sobic006G163600 Sobic009G070000 Sobic009G070000 Sobic010G136500--Sobic009G070000 Sobic010G191100 Sobic010G191100 Sobic010G136500--Sobic010G191100 Sobic004G155900 Sobic004G155900 Sobic010G136500--Sobic004G155900 Sobic008G137500--Sobic010G191100 Sobic005G111600 Sobic005G111600 Sobic008G137500--Sobic005G111600 Sobic002G408500 Sobic002G408500 Sobic008G137500--Sobic002G408500 Sobic009G229100 Sobic009G229100 Sobic008G137500--Sobic009G229100 Sobic008G137500--Sobic006G228100 Sobic008G137500--Sobic009G070000 Sobic008G137500--Sobic004G155900 Sobic008G137500--Sobic010G246500 Sobic002G154300 Sobic002G154300 Sobic008G137500--Sobic002G154300 Sobic001G530300 Sobic001G530300 Sobic006G228100--Sobic001G530300 Sobic006G228100--Sobic004G225400 Sobic006G271100 Sobic006G271100 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic006G228100--Sobic005G111600 Sobic002G004500 Sobic002G004500 Sobic006G228100--Sobic002G004500 Sobic006G228100--Sobic010G246500 Sobic001G399400 Sobic001G399400 Sobic006G228100--Sobic001G399400 Sobic006G228100--Sobic008G137500 Sobic009G070500 Sobic009G070500 Sobic010G246500--Sobic009G070500 Sobic003G239600 Sobic003G239600 Sobic010G246500--Sobic003G239600 Sobic010G246500--Sobic006G228100 Sobic002G312300 Sobic002G312300 Sobic010G246500--Sobic002G312300 Sobic003G298700 Sobic003G298700 Sobic010G246500--Sobic003G298700 Sobic010G246500--Sobic008G137500 Sobic010G078700 Sobic010G078700 Sobic010G246500--Sobic010G078700 Sobic002G194500 Sobic002G194500 Sobic010G246500--Sobic002G194500 Sobic002G202500 Sobic002G202500 Sobic010G246500--Sobic002G202500 Sobic007G081300 Sobic007G081300 Sobic003G301200--Sobic007G081300 Sobic006G278400 Sobic006G278400 Sobic003G301200--Sobic006G278400 Sobic003G235800 Sobic003G235800 Sobic003G301200--Sobic003G235800 Sobic001G180300 Sobic001G180300 Sobic003G301200--Sobic001G180300 Sobic004G227000 Sobic004G227000 Sobic003G301200--Sobic004G227000 Sobic010G189800 Sobic010G189800 Sobic003G301200--Sobic010G189800 Sobic008G163600 Sobic008G163600 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic006G187600 Sobic006G187600 Sobic003G301200--Sobic006G187600 Sobic004G225400--Sobic006G228100 Sobic004G225400--Sobic001G530300 Sobic004G225400--Sobic006G271100 Sobic004G225400--Sobic009G070000 Sobic002G219500 Sobic002G219500 Sobic004G225400--Sobic002G219500 Sobic007G017900 Sobic007G017900 Sobic004G225400--Sobic007G017900 Sobic004G225400--Sobic002G004500 Sobic004G225400--Sobic001G399400 Sobic004G225400--Sobic005G111600 Sobic006G163600--Sobic003G301200 Sobic006G163600--Sobic010G189800 Sobic006G163600--Sobic007G081300 Sobic006G163600--Sobic010G191100 Sobic002G221400 Sobic002G221400 Sobic006G163600--Sobic002G221400 Sobic006G163600--Sobic006G278400 Sobic006G163600--Sobic008G137500 Sobic006G163600--Sobic004G155900 Sobic006G247500 Sobic006G247500 Sobic006G163600--Sobic006G247500 Sobic009G070000--Sobic006G271100 Sobic003G047300 Sobic003G047300 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic004G049800 Sobic004G049800 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic001G511200 Sobic001G511200 Sobic009G070000--Sobic001G511200 Sobic010G191100--Sobic008G137500 Sobic010G191100--Sobic004G155900 Sobic010G191100--Sobic009G070500 Sobic010G191100--Sobic002G154300 Sobic010G191100--Sobic006G163600 Sobic010G191100--Sobic010G246500 Sobic010G191100--Sobic003G301200 Sobic002G229800 Sobic002G229800 Sobic010G191100--Sobic002G229800 Sobic001G273100 Sobic001G273100 Sobic010G191100--Sobic001G273100 Sobic004G155900--Sobic003G235800 Sobic004G155900--Sobic003G301200 Sobic004G155900--Sobic010G191100 Sobic002G416000 Sobic002G416000 Sobic004G155900--Sobic002G416000 Sobic004G155900--Sobic002G229800 Sobic004G155900--Sobic008G137500 Sobic004G155900--Sobic007G081300 Sobic004G155900--Sobic010G189800 Sobic004G155900--Sobic006G278400
Octagon: transcription factors


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