Gene annotation
Transcriptome id Sobic.006G228100.1
Synonym Sb06g029660, XTH9
Functional annotation glycosyl hydrolases family 16 protein, protein, expressed
UniProt C5YGN0
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF11
NCBI CDD -
KEGG Orthology K08235; xyloglucan:xyloglucosyl transferase
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G03210 : xyloglucan endotransglucosylase/hydrolase 9
RAP-DB (Rice) LOC_Os04g53950.2 : glycosyl hydrolases family 16 protein, protein, expressed
MaizeGDB (Corn) Zm00025a018308 , Zm00025a048260 , Zm00025a009913 , Zm00025a018310 , Zm00025a009680 , Zm00025a056955 , Zm00025a009908
Brachypodium KQK17339 , KQK17338 , KQJ84798 , KQJ84412 , KQJ97550 , KQJ95699 , KQJ95697
Barley HORVU1Hr1G087320.3 , HORVU1Hr1G087320.2 , HORVU1Hr1G087320.1 , HORVU6Hr1G081590.1 , HORVU2Hr1G045330.4 , HORVU6Hr1G081590.3 , HORVU2Hr1G045330.6 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU2Hr1G045330.3 , HORVU7Hr1G081740.1 , HORVU2Hr1G108420.5 , HORVU2Hr1G108420.6 , HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.4 , HORVU7Hr1G098370.2 , HORVU7Hr1G098370.3 , HORVU7Hr1G098370.1 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU7Hr1G098390.4 , HORVU2Hr1G108420.4 , HORVU2Hr1G045330.5 , HORVU2Hr1G045330.7 , HORVU6Hr1G081590.2 , HORVU7Hr1G098370.4
Wheat TraesCS6D02G318500 , TraesCS2B02G454600 , TraesCS2B02G454600 , TraesCS1A02G396200 , TraesCS1D02G404300 , TraesCS7B02G327400 , TraesCS2A02G484100 , TraesCS2A02G484100 , TraesCS7B02G327700 , TraesCS2B02G454800 , TraesCS2D02G431600 , TraesCS7A02G427600 , TraesCS1B02G424500 , TraesCS7B02G327500 , TraesCS6B02G368300 , TraesCS7D02G419600 , TraesCS7A02G427100 , TraesCS2D02G484000 , TraesCS7D02G419400 , TraesCS2D02G484000 , TraesCS7A02G427300 , TraesCS2A02G433600 , TraesCS7A02G427200 , TraesCS2D02G431800 , TraesCS7A02G331200 , TraesCS2B02G510200 , TraesCS2B02G510200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G530300 HOTHEAD precursor, putative, expressed -
2 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
3 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
5 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
6 Sobic.002G004500 expressed protein -
7 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
8 Sobic.001G399400 calmodulin binding protein, putative, expressed -
9 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
11 Sobic.002G219500 ATPase, putative, expressed -
12 Sobic.003G239600 chloroplast unusual positioning protein, putative, expressed -
13 Sobic.007G017900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
14 Sobic.010G136500 expressed protein -
15 Sobic.010G078700 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.009G229100 expressed protein -
17 Sobic.003G399400 expressed protein -
18 Sobic.002G194500 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
19 Sobic.002G206400 similar to Os09g0423800 protein(PubMedID : 29862293)@AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
20 Sobic.007G153400 ANTH domain containing protein, expressed -


Gene co-expression network
sample Sobic006G228100 Sobic006G228100 Sobic001G530300 Sobic001G530300 Sobic006G228100--Sobic001G530300 Sobic004G225400 Sobic004G225400 Sobic006G228100--Sobic004G225400 Sobic006G271100 Sobic006G271100 Sobic006G228100--Sobic006G271100 Sobic009G070000 Sobic009G070000 Sobic006G228100--Sobic009G070000 Sobic005G111600 Sobic005G111600 Sobic006G228100--Sobic005G111600 Sobic002G004500 Sobic002G004500 Sobic006G228100--Sobic002G004500 Sobic010G246500 Sobic010G246500 Sobic006G228100--Sobic010G246500 Sobic001G399400 Sobic001G399400 Sobic006G228100--Sobic001G399400 Sobic008G137500 Sobic008G137500 Sobic006G228100--Sobic008G137500 Sobic001G530300--Sobic006G228100 Sobic001G530300--Sobic004G225400 Sobic007G017900 Sobic007G017900 Sobic001G530300--Sobic007G017900 Sobic001G530300--Sobic006G271100 Sobic001G530300--Sobic010G246500 Sobic001G530300--Sobic009G070000 Sobic001G530300--Sobic002G004500 Sobic007G153400 Sobic007G153400 Sobic001G530300--Sobic007G153400 Sobic009G229100 Sobic009G229100 Sobic001G530300--Sobic009G229100 Sobic004G225400--Sobic006G228100 Sobic004G225400--Sobic001G530300 Sobic004G225400--Sobic006G271100 Sobic004G225400--Sobic009G070000 Sobic002G219500 Sobic002G219500 Sobic004G225400--Sobic002G219500 Sobic004G225400--Sobic007G017900 Sobic004G225400--Sobic002G004500 Sobic004G225400--Sobic001G399400 Sobic004G225400--Sobic005G111600 Sobic006G271100--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic006G271100--Sobic001G399400 Sobic004G049800 Sobic004G049800 Sobic006G271100--Sobic004G049800 Sobic001G511200 Sobic001G511200 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic006G271100--Sobic002G219500 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic009G070000--Sobic001G511200 Sobic005G111600--Sobic009G070000 Sobic005G111600--Sobic008G137500 Sobic005G111600--Sobic003G047300 Sobic005G111600--Sobic006G271100 Sobic005G111600--Sobic009G229100 Sobic005G111600--Sobic006G228100 Sobic002G408500 Sobic002G408500 Sobic005G111600--Sobic002G408500 Sobic002G206400 Sobic002G206400 Sobic005G111600--Sobic002G206400 Sobic004G296100 Sobic004G296100 Sobic005G111600--Sobic004G296100 Sobic003G399400 Sobic003G399400 Sobic002G004500--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic002G004500--Sobic006G108700 Sobic002G004500--Sobic006G228100 Sobic002G004500--Sobic006G271100 Sobic002G004500--Sobic001G399400 Sobic002G004500--Sobic002G219500 Sobic002G004500--Sobic004G225400 Sobic002G004500--Sobic003G184500 Sobic002G004500--Sobic001G530300 Sobic009G070500 Sobic009G070500 Sobic010G246500--Sobic009G070500 Sobic003G239600 Sobic003G239600 Sobic010G246500--Sobic003G239600 Sobic010G246500--Sobic006G228100 Sobic002G312300 Sobic002G312300 Sobic010G246500--Sobic002G312300 Sobic003G298700 Sobic003G298700 Sobic010G246500--Sobic003G298700 Sobic010G246500--Sobic008G137500 Sobic010G078700 Sobic010G078700 Sobic010G246500--Sobic010G078700 Sobic002G194500 Sobic002G194500 Sobic010G246500--Sobic002G194500 Sobic002G202500 Sobic002G202500 Sobic010G246500--Sobic002G202500 Sobic001G399400--Sobic002G219500 Sobic001G399400--Sobic006G271100 Sobic001G399400--Sobic003G184500 Sobic001G399400--Sobic009G070000 Sobic001G399400--Sobic006G228100 Sobic001G399400--Sobic003G399400 Sobic001G399400--Sobic002G004500 Sobic005G188400 Sobic005G188400 Sobic001G399400--Sobic005G188400 Sobic004G077100 Sobic004G077100 Sobic001G399400--Sobic004G077100 Sobic010G191100 Sobic010G191100 Sobic008G137500--Sobic010G191100 Sobic008G137500--Sobic005G111600 Sobic008G137500--Sobic002G408500 Sobic008G137500--Sobic009G229100 Sobic008G137500--Sobic006G228100 Sobic008G137500--Sobic009G070000 Sobic004G155900 Sobic004G155900 Sobic008G137500--Sobic004G155900 Sobic008G137500--Sobic010G246500 Sobic002G154300 Sobic002G154300 Sobic008G137500--Sobic002G154300
Octagon: transcription factors


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