Gene annotation
Transcriptome id Sobic.001G530300.1
Synonym Sb01g049320
Functional annotation HOTHEAD precursor, putative, expressed
UniProt C5X0Z1
Pfam PF05199 PF00732
Panther DB PTHR11552 PTHR11552:SF112
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016614; oxidoreductase activity, acting on CH-OH group of donors


Orthologs (automatic annotation)
TAIR AT1G12570 : Glucose-methanol-choline (GMC) oxidoreductase family protein
RAP-DB (Rice) LOC_Os03g02700.1 : HOTHEAD precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021507 , Zm00025a010145 , Zm00025a003093 , Zm00025a053519
Brachypodium KQJ84131 , KQK00765 , KQJ97532 , PNT78317
Barley HORVU2Hr1G094680.3 , HORVU2Hr1G094680.2 , HORVU1Hr1G048960.1 , HORVU1Hr1G048960.2 , HORVU1Hr1G048960.3 , HORVU4Hr1G085790.1 , HORVU4Hr1G085790.3 , HORVU4Hr1G085790.2 , HORVU6Hr1G065720.1 , HORVU6Hr1G065720.2
Wheat TraesCS1D02G189200 , TraesCS4B02G353200 , TraesCS4B02G353200 , TraesCS2B02G417100 , TraesCS2B02G417100 , TraesCS6D02G238700 , TraesCS5A02G522000 , TraesCS1A02G187500 , TraesCS6A02G257400 , TraesCS4D02G347200 , TraesCS4D02G347200 , TraesCS6B02G267700 , TraesCS2A02G399100 , TraesCS2A02G399100 , TraesCS2D02G396600 , TraesCS1B02G195300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
3 Sobic.007G017900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
4 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
6 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
7 Sobic.002G004500 expressed protein -
8 Sobic.007G153400 ANTH domain containing protein, expressed -
9 Sobic.009G229100 expressed protein -
10 Sobic.006G237800 jp18, putative, expressed -
11 Sobic.002G219500 ATPase, putative, expressed -
12 Sobic.001G399400 calmodulin binding protein, putative, expressed -
13 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
14 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
15 Sobic.003G239600 chloroplast unusual positioning protein, putative, expressed -
16 Sobic.001G511200 expressed protein -
17 Sobic.002G194500 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
18 Sobic.008G127200 expressed protein -
19 Sobic.003G364700 expressed protein -
20 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -


Gene co-expression network
sample Sobic001G530300 Sobic001G530300 Sobic006G228100 Sobic006G228100 Sobic001G530300--Sobic006G228100 Sobic004G225400 Sobic004G225400 Sobic001G530300--Sobic004G225400 Sobic007G017900 Sobic007G017900 Sobic001G530300--Sobic007G017900 Sobic006G271100 Sobic006G271100 Sobic001G530300--Sobic006G271100 Sobic010G246500 Sobic010G246500 Sobic001G530300--Sobic010G246500 Sobic009G070000 Sobic009G070000 Sobic001G530300--Sobic009G070000 Sobic002G004500 Sobic002G004500 Sobic001G530300--Sobic002G004500 Sobic007G153400 Sobic007G153400 Sobic001G530300--Sobic007G153400 Sobic009G229100 Sobic009G229100 Sobic001G530300--Sobic009G229100 Sobic006G228100--Sobic001G530300 Sobic006G228100--Sobic004G225400 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic005G111600 Sobic005G111600 Sobic006G228100--Sobic005G111600 Sobic006G228100--Sobic002G004500 Sobic006G228100--Sobic010G246500 Sobic001G399400 Sobic001G399400 Sobic006G228100--Sobic001G399400 Sobic008G137500 Sobic008G137500 Sobic006G228100--Sobic008G137500 Sobic004G225400--Sobic006G228100 Sobic004G225400--Sobic001G530300 Sobic004G225400--Sobic006G271100 Sobic004G225400--Sobic009G070000 Sobic002G219500 Sobic002G219500 Sobic004G225400--Sobic002G219500 Sobic004G225400--Sobic007G017900 Sobic004G225400--Sobic002G004500 Sobic004G225400--Sobic001G399400 Sobic004G225400--Sobic005G111600 Sobic003G178200 Sobic003G178200 Sobic007G017900--Sobic003G178200 Sobic007G017900--Sobic009G229100 Sobic010G145200 Sobic010G145200 Sobic007G017900--Sobic010G145200 Sobic003G245700 Sobic003G245700 Sobic007G017900--Sobic003G245700 Sobic007G072901 Sobic007G072901 Sobic007G017900--Sobic007G072901 Sobic005G022400 Sobic005G022400 Sobic007G017900--Sobic005G022400 Sobic001G527500 Sobic001G527500 Sobic007G017900--Sobic001G527500 Sobic005G189400 Sobic005G189400 Sobic007G017900--Sobic005G189400 Sobic003G364700 Sobic003G364700 Sobic007G017900--Sobic003G364700 Sobic006G271100--Sobic009G070000 Sobic003G047300 Sobic003G047300 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic006G271100--Sobic001G399400 Sobic004G049800 Sobic004G049800 Sobic006G271100--Sobic004G049800 Sobic001G511200 Sobic001G511200 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic006G271100--Sobic002G219500 Sobic009G070500 Sobic009G070500 Sobic010G246500--Sobic009G070500 Sobic003G239600 Sobic003G239600 Sobic010G246500--Sobic003G239600 Sobic010G246500--Sobic006G228100 Sobic002G312300 Sobic002G312300 Sobic010G246500--Sobic002G312300 Sobic003G298700 Sobic003G298700 Sobic010G246500--Sobic003G298700 Sobic010G246500--Sobic008G137500 Sobic010G078700 Sobic010G078700 Sobic010G246500--Sobic010G078700 Sobic002G194500 Sobic002G194500 Sobic010G246500--Sobic002G194500 Sobic002G202500 Sobic002G202500 Sobic010G246500--Sobic002G202500 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic009G070000--Sobic003G364700 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic009G070000--Sobic001G511200 Sobic003G399400 Sobic003G399400 Sobic002G004500--Sobic003G399400 Sobic006G108700 Sobic006G108700 Sobic002G004500--Sobic006G108700 Sobic002G004500--Sobic006G228100 Sobic002G004500--Sobic006G271100 Sobic002G004500--Sobic001G399400 Sobic002G004500--Sobic002G219500 Sobic002G004500--Sobic004G225400 Sobic002G004500--Sobic003G184500 Sobic002G004500--Sobic001G530300 Sobic007G153400--Sobic001G530300 Sobic007G153400--Sobic006G228100 Sobic007G153400--Sobic007G017900 Sobic003G021800 Sobic003G021800 Sobic007G153400--Sobic003G021800 Sobic002G237700 Sobic002G237700 Sobic007G153400--Sobic002G237700 Sobic009G233600 Sobic009G233600 Sobic007G153400--Sobic009G233600 Sobic007G153400--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic007G153400--Sobic006G069500 Sobic007G153400--Sobic004G225400 Sobic009G229100--Sobic003G364700 Sobic009G229100--Sobic009G233600 Sobic002G356700 Sobic002G356700 Sobic009G229100--Sobic002G356700 Sobic009G229100--Sobic001G527500 Sobic009G229100--Sobic003G178200 Sobic009G229100--Sobic007G017900 Sobic009G229100--Sobic003G245700 Sobic009G229100--Sobic001G511200 Sobic003G423100 Sobic003G423100 Sobic009G229100--Sobic003G423100
Octagon: transcription factors


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