Gene annotation
Transcriptome id Sobic.010G145200.2,Sobic.010G145200.1
Synonym Sb10g019120
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
CPuORF31 - conserved peptide uORF-containing transcript, expressed
UniProt C5Z341 , A0A1W0VT30
Pfam -
Panther DB PTHR12565 PTHR12565:SF155
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G29950 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g39432.2,LOC_Os03g39432.1 : CPuORF31 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a051109 , Zm00025a042392 , Zm00025a042300
Brachypodium KQJ94524
Barley HORVU7Hr1G083390.8 , HORVU7Hr1G083390.9 , HORVU7Hr1G083390.1 , HORVU7Hr1G083390.2 , HORVU7Hr1G083390.3 , HORVU7Hr1G083390.4 , HORVU7Hr1G083390.5 , HORVU7Hr1G083390.6 , HORVU7Hr1G083390.7 , HORVU7Hr1G083390.10
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G004400 expressed protein -
2 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.007G072901 - -
4 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
5 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
6 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.001G361500 expressed protein -
8 Sobic.006G090201 - -
9 Sobic.003G343100 expressed protein -
10 Sobic.010G014600 aspartic protease, putative, expressed -
11 Sobic.004G330500 expressed protein -
12 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.005G087600 AP2 domain containing protein, expressed -
14 Sobic.006G185400 - -
15 Sobic.010G231400 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.004G351866 - -
17 Sobic.003G201300 hsp20/alpha crystallin family protein, putative, expressed -
18 Sobic.002G205201 - -
19 Sobic.006G209100 - -
20 Sobic.008G023500 expressed protein -


Gene co-expression network
sample Sobic010G145200 Sobic010G145200 Sobic002G004400 Sobic002G004400 Sobic010G145200--Sobic002G004400 Sobic003G178200 Sobic003G178200 Sobic010G145200--Sobic003G178200 Sobic007G072901 Sobic007G072901 Sobic010G145200--Sobic007G072901 Sobic003G245700 Sobic003G245700 Sobic010G145200--Sobic003G245700 Sobic002G356700 Sobic002G356700 Sobic010G145200--Sobic002G356700 Sobic005G189400 Sobic005G189400 Sobic010G145200--Sobic005G189400 Sobic001G361500 Sobic001G361500 Sobic010G145200--Sobic001G361500 Sobic006G090201 Sobic006G090201 Sobic010G145200--Sobic006G090201 Sobic003G343100 Sobic003G343100 Sobic010G145200--Sobic003G343100 Sobic010G014600 Sobic010G014600 Sobic002G004400--Sobic010G014600 Sobic002G004400--Sobic006G090201 Sobic002G004400--Sobic007G072901 Sobic002G004400--Sobic005G189400 Sobic004G330500 Sobic004G330500 Sobic002G004400--Sobic004G330500 Sobic005G037500 Sobic005G037500 Sobic002G004400--Sobic005G037500 Sobic007G152200 Sobic007G152200 Sobic002G004400--Sobic007G152200 Sobic006G185400 Sobic006G185400 Sobic002G004400--Sobic006G185400 Sobic002G004400--Sobic003G343100 Sobic003G178200--Sobic003G245700 Sobic003G178200--Sobic005G189400 Sobic003G178200--Sobic004G330500 Sobic003G178200--Sobic006G185400 Sobic008G023500 Sobic008G023500 Sobic003G178200--Sobic008G023500 Sobic003G178200--Sobic006G090201 Sobic003G178200--Sobic007G152200 Sobic003G178200--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic003G178200--Sobic002G205201 Sobic004G351866 Sobic004G351866 Sobic007G072901--Sobic004G351866 Sobic007G072901--Sobic008G023500 Sobic007G072901--Sobic005G189400 Sobic007G072901--Sobic006G090201 Sobic007G072901--Sobic003G245700 Sobic007G072901--Sobic004G330500 Sobic007G072901--Sobic006G185400 Sobic007G072901--Sobic007G152200 Sobic003G357000 Sobic003G357000 Sobic007G072901--Sobic003G357000 Sobic003G245700--Sobic003G178200 Sobic003G245700--Sobic005G189400 Sobic003G245700--Sobic006G185400 Sobic003G245700--Sobic004G330500 Sobic003G245700--Sobic008G023500 Sobic003G245700--Sobic006G090201 Sobic003G245700--Sobic002G205201 Sobic003G245700--Sobic007G152200 Sobic003G245700--Sobic001G361500 Sobic009G233600 Sobic009G233600 Sobic002G356700--Sobic009G233600 Sobic002G356700--Sobic003G178200 Sobic002G356700--Sobic003G245700 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic002G356700--Sobic001G361500 Sobic002G356700--Sobic008G023500 Sobic009G164200 Sobic009G164200 Sobic002G356700--Sobic009G164200 Sobic002G356700--Sobic007G072901 Sobic005G189400--Sobic004G330500 Sobic005G189400--Sobic006G185400 Sobic005G189400--Sobic007G152200 Sobic005G189400--Sobic002G205201 Sobic005G189400--Sobic001G361500 Sobic006G209100 Sobic006G209100 Sobic005G189400--Sobic006G209100 Sobic005G189400--Sobic008G023500 Sobic005G189400--Sobic003G245700 Sobic005G189400--Sobic006G090201 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic001G361500--Sobic005G037500 Sobic006G090201--Sobic005G189400 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic006G090201--Sobic007G152200 Sobic006G090201--Sobic006G209100 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic006G090201--Sobic008G023500 Sobic006G090201--Sobic002G205201 Sobic010G275550 Sobic010G275550 Sobic003G343100--Sobic010G275550 Sobic003G343100--Sobic005G189400 Sobic003G343100--Sobic003G245700 Sobic003G343100--Sobic004G330500 Sobic003G343100--Sobic006G185400 Sobic003G343100--Sobic005G037500 Sobic003G343100--Sobic008G023500 Sobic003G343100--Sobic006G090201 Sobic002G037000 Sobic002G037000 Sobic003G343100--Sobic002G037000
Octagon: transcription factors


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