Gene annotation
Transcriptome id Sobic.002G356700.1
Synonym
Functional annotation OsFBD6 - F-box and FBD domain containing protein, expressed
UniProt A0A1W0W720
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G26860 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os02g08160.1 : OsFBD6 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
2 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
3 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
4 Sobic.006G090201 - -
5 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
6 Sobic.001G361500 expressed protein -
7 Sobic.008G023500 expressed protein -
8 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
9 Sobic.007G072901 - -
10 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G004400 expressed protein -
12 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.006G185400 - -
14 Sobic.004G330500 expressed protein -
15 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
16 Sobic.003G343100 expressed protein -
17 Sobic.009G229100 expressed protein -
18 Sobic.002G037000 ZOS7-02 - C2H2 zinc finger protein, expressed -
19 Sobic.006G209100 - -
20 Sobic.007G051501 - -


Gene co-expression network
sample Sobic002G356700 Sobic002G356700 Sobic009G233600 Sobic009G233600 Sobic002G356700--Sobic009G233600 Sobic003G178200 Sobic003G178200 Sobic002G356700--Sobic003G178200 Sobic003G245700 Sobic003G245700 Sobic002G356700--Sobic003G245700 Sobic006G090201 Sobic006G090201 Sobic002G356700--Sobic006G090201 Sobic005G022400 Sobic005G022400 Sobic002G356700--Sobic005G022400 Sobic001G361500 Sobic001G361500 Sobic002G356700--Sobic001G361500 Sobic008G023500 Sobic008G023500 Sobic002G356700--Sobic008G023500 Sobic009G164200 Sobic009G164200 Sobic002G356700--Sobic009G164200 Sobic007G072901 Sobic007G072901 Sobic002G356700--Sobic007G072901 Sobic009G233600--Sobic002G356700 Sobic009G229100 Sobic009G229100 Sobic009G233600--Sobic009G229100 Sobic003G364700 Sobic003G364700 Sobic009G233600--Sobic003G364700 Sobic001G511200 Sobic001G511200 Sobic009G233600--Sobic001G511200 Sobic004G356600 Sobic004G356600 Sobic009G233600--Sobic004G356600 Sobic009G233600--Sobic005G022400 Sobic010G145200 Sobic010G145200 Sobic009G233600--Sobic010G145200 Sobic009G233600--Sobic003G178200 Sobic002G237700 Sobic002G237700 Sobic009G233600--Sobic002G237700 Sobic003G178200--Sobic003G245700 Sobic005G189400 Sobic005G189400 Sobic003G178200--Sobic005G189400 Sobic004G330500 Sobic004G330500 Sobic003G178200--Sobic004G330500 Sobic006G185400 Sobic006G185400 Sobic003G178200--Sobic006G185400 Sobic003G178200--Sobic008G023500 Sobic003G178200--Sobic006G090201 Sobic007G152200 Sobic007G152200 Sobic003G178200--Sobic007G152200 Sobic003G178200--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic003G178200--Sobic002G205201 Sobic003G245700--Sobic003G178200 Sobic003G245700--Sobic005G189400 Sobic003G245700--Sobic006G185400 Sobic003G245700--Sobic004G330500 Sobic003G245700--Sobic008G023500 Sobic003G245700--Sobic006G090201 Sobic003G245700--Sobic002G205201 Sobic003G245700--Sobic007G152200 Sobic003G245700--Sobic001G361500 Sobic006G090201--Sobic005G189400 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic006G090201--Sobic007G152200 Sobic006G209100 Sobic006G209100 Sobic006G090201--Sobic006G209100 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic006G090201--Sobic008G023500 Sobic006G090201--Sobic002G205201 Sobic005G022400--Sobic008G023500 Sobic009G010800 Sobic009G010800 Sobic005G022400--Sobic009G010800 Sobic005G022400--Sobic007G072901 Sobic005G022400--Sobic003G245700 Sobic005G022400--Sobic007G152200 Sobic005G022400--Sobic005G189400 Sobic005G022400--Sobic004G330500 Sobic005G022400--Sobic006G185400 Sobic005G022400--Sobic006G090201 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic005G037500 Sobic005G037500 Sobic001G361500--Sobic005G037500 Sobic008G023500--Sobic006G185400 Sobic008G023500--Sobic004G330500 Sobic008G023500--Sobic005G189400 Sobic008G023500--Sobic009G164200 Sobic008G023500--Sobic003G245700 Sobic008G023500--Sobic002G205201 Sobic008G023500--Sobic007G152200 Sobic008G023500--Sobic006G209100 Sobic008G023500--Sobic001G361500 Sobic009G164200--Sobic004G330500 Sobic009G164200--Sobic006G185400 Sobic009G164200--Sobic008G023500 Sobic009G164200--Sobic005G189400 Sobic009G164200--Sobic001G361500 Sobic009G164200--Sobic006G209100 Sobic009G164200--Sobic007G152200 Sobic009G164200--Sobic002G205201 Sobic009G164200--Sobic005G037500 Sobic004G351866 Sobic004G351866 Sobic007G072901--Sobic004G351866 Sobic007G072901--Sobic008G023500 Sobic007G072901--Sobic005G189400 Sobic007G072901--Sobic006G090201 Sobic007G072901--Sobic003G245700 Sobic007G072901--Sobic004G330500 Sobic007G072901--Sobic006G185400 Sobic007G072901--Sobic007G152200 Sobic003G357000 Sobic003G357000 Sobic007G072901--Sobic003G357000
Octagon: transcription factors


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