Gene annotation
Transcriptome id Sobic.004G356600.1
Synonym Sb04g038305
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A194YT54
Pfam PF13812 PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF857
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66520 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os02g58330.1 : expressed protein
MaizeGDB (Corn) Zm00025a042365 , Zm00025a022671
Brachypodium KQK02135
Barley HORVU2Hr1G038110.3 , HORVU2Hr1G038110.2 , HORVU2Hr1G038110.6 , HORVU0Hr1G001760.1 , HORVU0Hr1G001760.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G356600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G090201 - -
2 Sobic.007G072901 - -
3 Sobic.009G010800 expressed protein -
4 Sobic.001G361500 expressed protein -
5 Sobic.003G423100 NAM, putative, expressed -
6 Sobic.003G357000 - -
7 Sobic.009G164200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.006G185400 - -
9 Sobic.003G245700 3-5 exonuclease domain-containing protein, putative, expressed -
10 Sobic.004G330500 expressed protein -
11 Sobic.005G189400 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.005G022400 GATA zinc finger domain containing protein, expressed -
13 Sobic.008G023500 expressed protein -
14 Sobic.002G004400 expressed protein -
15 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
16 Sobic.006G209100 - -
17 Sobic.007G152200 cytokinesis negative regulator RCP1, putative, expressed -
18 Sobic.003G178200 tetratricopeptide repeat containing protein, putative, expressed -
19 Sobic.003G343100 expressed protein -
20 Sobic.005G087600 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G356600 Sobic004G356600 Sobic006G090201 Sobic006G090201 Sobic004G356600--Sobic006G090201 Sobic007G072901 Sobic007G072901 Sobic004G356600--Sobic007G072901 Sobic009G010800 Sobic009G010800 Sobic004G356600--Sobic009G010800 Sobic001G361500 Sobic001G361500 Sobic004G356600--Sobic001G361500 Sobic003G423100 Sobic003G423100 Sobic004G356600--Sobic003G423100 Sobic003G357000 Sobic003G357000 Sobic004G356600--Sobic003G357000 Sobic009G164200 Sobic009G164200 Sobic004G356600--Sobic009G164200 Sobic006G185400 Sobic006G185400 Sobic004G356600--Sobic006G185400 Sobic003G245700 Sobic003G245700 Sobic004G356600--Sobic003G245700 Sobic005G189400 Sobic005G189400 Sobic006G090201--Sobic005G189400 Sobic004G330500 Sobic004G330500 Sobic006G090201--Sobic004G330500 Sobic006G090201--Sobic006G185400 Sobic007G152200 Sobic007G152200 Sobic006G090201--Sobic007G152200 Sobic006G209100 Sobic006G209100 Sobic006G090201--Sobic006G209100 Sobic006G090201--Sobic003G245700 Sobic006G090201--Sobic001G361500 Sobic008G023500 Sobic008G023500 Sobic006G090201--Sobic008G023500 Sobic002G205201 Sobic002G205201 Sobic006G090201--Sobic002G205201 Sobic004G351866 Sobic004G351866 Sobic007G072901--Sobic004G351866 Sobic007G072901--Sobic008G023500 Sobic007G072901--Sobic005G189400 Sobic007G072901--Sobic006G090201 Sobic007G072901--Sobic003G245700 Sobic007G072901--Sobic004G330500 Sobic007G072901--Sobic006G185400 Sobic007G072901--Sobic007G152200 Sobic007G072901--Sobic003G357000 Sobic009G010800--Sobic006G185400 Sobic009G010800--Sobic004G330500 Sobic009G010800--Sobic005G189400 Sobic009G010800--Sobic001G361500 Sobic009G010800--Sobic002G205201 Sobic009G010800--Sobic006G209100 Sobic009G010800--Sobic007G152200 Sobic009G010800--Sobic008G023500 Sobic009G010800--Sobic003G245700 Sobic001G361500--Sobic006G185400 Sobic001G361500--Sobic004G330500 Sobic001G361500--Sobic005G189400 Sobic001G361500--Sobic006G209100 Sobic001G361500--Sobic002G205201 Sobic001G361500--Sobic007G152200 Sobic001G361500--Sobic009G164200 Sobic001G361500--Sobic008G023500 Sobic005G037500 Sobic005G037500 Sobic001G361500--Sobic005G037500 Sobic003G423100--Sobic002G205201 Sobic005G022400 Sobic005G022400 Sobic003G423100--Sobic005G022400 Sobic003G423100--Sobic003G245700 Sobic003G423100--Sobic006G090201 Sobic003G423100--Sobic005G189400 Sobic003G423100--Sobic004G330500 Sobic003G423100--Sobic006G185400 Sobic003G423100--Sobic007G152200 Sobic003G423100--Sobic001G361500 Sobic003G357000--Sobic008G023500 Sobic003G357000--Sobic004G351866 Sobic003G357000--Sobic006G185400 Sobic003G357000--Sobic004G330500 Sobic003G357000--Sobic005G189400 Sobic003G357000--Sobic009G164200 Sobic003G357000--Sobic002G205201 Sobic003G357000--Sobic001G361500 Sobic003G357000--Sobic006G209100 Sobic009G164200--Sobic004G330500 Sobic009G164200--Sobic006G185400 Sobic009G164200--Sobic008G023500 Sobic009G164200--Sobic005G189400 Sobic009G164200--Sobic001G361500 Sobic009G164200--Sobic006G209100 Sobic009G164200--Sobic007G152200 Sobic009G164200--Sobic002G205201 Sobic009G164200--Sobic005G037500 Sobic006G185400--Sobic004G330500 Sobic006G185400--Sobic005G189400 Sobic006G185400--Sobic001G361500 Sobic006G185400--Sobic007G152200 Sobic006G185400--Sobic002G205201 Sobic006G185400--Sobic006G209100 Sobic006G185400--Sobic008G023500 Sobic006G185400--Sobic005G037500 Sobic006G185400--Sobic009G164200 Sobic003G178200 Sobic003G178200 Sobic003G245700--Sobic003G178200 Sobic003G245700--Sobic005G189400 Sobic003G245700--Sobic006G185400 Sobic003G245700--Sobic004G330500 Sobic003G245700--Sobic008G023500 Sobic003G245700--Sobic006G090201 Sobic003G245700--Sobic002G205201 Sobic003G245700--Sobic007G152200 Sobic003G245700--Sobic001G361500
Octagon: transcription factors


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