Gene annotation
Transcriptome id Sobic.005G111600.2
Synonym Sb05g013180
Functional annotation CRP7 - Cysteine-rich family protein precursor, expressed
UniProt A0A1Z5RIC0
Pfam -
Panther DB PTHR33786 PTHR33786:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65295 : -
RAP-DB (Rice) LOC_Os11g27540.1 : CRP7 - Cysteine-rich family protein precursor, expressed
MaizeGDB (Corn) Zm00025a012634 , Zm00025a026292
Brachypodium KQK11205
Barley -
Wheat TraesCS3B02G458700 , TraesCS3A02G423100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
2 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
4 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.009G229100 expressed protein -
6 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
7 Sobic.002G408500 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
8 Sobic.002G206400 similar to Os09g0423800 protein(PubMedID : 29862293)@AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.003G364700 expressed protein -
11 Sobic.006G053800 LGC1, putative, expressed -
12 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
13 Sobic.001G049000 OsFBD9 - F-box and FBD domain containing protein, expressed -
14 Sobic.001G267266 - -
15 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G527500 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA methyltransferase, TrmH family protein, putative, expressed K03437: RNA methyltransferase, TrmH family
18 Sobic.001G511200 expressed protein -
19 Sobic.009G178900 histone H3, putative, expressed K11253: histone H3
20 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic005G111600 Sobic005G111600 Sobic009G070000 Sobic009G070000 Sobic005G111600--Sobic009G070000 Sobic008G137500 Sobic008G137500 Sobic005G111600--Sobic008G137500 Sobic003G047300 Sobic003G047300 Sobic005G111600--Sobic003G047300 Sobic006G271100 Sobic006G271100 Sobic005G111600--Sobic006G271100 Sobic009G229100 Sobic009G229100 Sobic005G111600--Sobic009G229100 Sobic006G228100 Sobic006G228100 Sobic005G111600--Sobic006G228100 Sobic002G408500 Sobic002G408500 Sobic005G111600--Sobic002G408500 Sobic002G206400 Sobic002G206400 Sobic005G111600--Sobic002G206400 Sobic004G296100 Sobic004G296100 Sobic005G111600--Sobic004G296100 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic004G049800 Sobic004G049800 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic001G511200 Sobic001G511200 Sobic009G070000--Sobic001G511200 Sobic010G191100 Sobic010G191100 Sobic008G137500--Sobic010G191100 Sobic008G137500--Sobic005G111600 Sobic008G137500--Sobic002G408500 Sobic008G137500--Sobic009G229100 Sobic008G137500--Sobic006G228100 Sobic008G137500--Sobic009G070000 Sobic004G155900 Sobic004G155900 Sobic008G137500--Sobic004G155900 Sobic010G246500 Sobic010G246500 Sobic008G137500--Sobic010G246500 Sobic002G154300 Sobic002G154300 Sobic008G137500--Sobic002G154300 Sobic003G047300--Sobic009G070000 Sobic003G047300--Sobic006G271100 Sobic003G047300--Sobic001G049000 Sobic003G047300--Sobic004G296100 Sobic003G047300--Sobic005G111600 Sobic003G047300--Sobic003G364700 Sobic010G145200 Sobic010G145200 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic003G047300--Sobic004G049800 Sobic006G271100--Sobic009G070000 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic001G399400 Sobic001G399400 Sobic006G271100--Sobic001G399400 Sobic006G271100--Sobic004G049800 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic002G219500 Sobic002G219500 Sobic006G271100--Sobic002G219500 Sobic009G229100--Sobic003G364700 Sobic009G233600 Sobic009G233600 Sobic009G229100--Sobic009G233600 Sobic002G356700 Sobic002G356700 Sobic009G229100--Sobic002G356700 Sobic001G527500 Sobic001G527500 Sobic009G229100--Sobic001G527500 Sobic003G178200 Sobic003G178200 Sobic009G229100--Sobic003G178200 Sobic007G017900 Sobic007G017900 Sobic009G229100--Sobic007G017900 Sobic003G245700 Sobic003G245700 Sobic009G229100--Sobic003G245700 Sobic009G229100--Sobic001G511200 Sobic003G423100 Sobic003G423100 Sobic009G229100--Sobic003G423100 Sobic001G530300 Sobic001G530300 Sobic006G228100--Sobic001G530300 Sobic004G225400 Sobic004G225400 Sobic006G228100--Sobic004G225400 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic006G228100--Sobic005G111600 Sobic002G004500 Sobic002G004500 Sobic006G228100--Sobic002G004500 Sobic006G228100--Sobic010G246500 Sobic006G228100--Sobic001G399400 Sobic006G228100--Sobic008G137500 Sobic002G408500--Sobic008G137500 Sobic002G408500--Sobic005G111600 Sobic002G408500--Sobic009G229100 Sobic002G408500--Sobic002G154300 Sobic002G408500--Sobic003G364700 Sobic002G408500--Sobic010G191100 Sobic002G408500--Sobic002G206400 Sobic002G025300 Sobic002G025300 Sobic002G408500--Sobic002G025300 Sobic010G271000 Sobic010G271000 Sobic002G408500--Sobic010G271000 Sobic002G206400--Sobic005G111600 Sobic002G206400--Sobic009G070000 Sobic002G206400--Sobic002G025300 Sobic002G206400--Sobic004G296100 Sobic002G206400--Sobic003G047300 Sobic002G206400--Sobic006G271100 Sobic002G206400--Sobic006G228100 Sobic002G206400--Sobic004G049800 Sobic002G206400--Sobic008G137500 Sobic004G296100--Sobic004G049800 Sobic004G296100--Sobic003G047300 Sobic004G296100--Sobic009G070000 Sobic004G296100--Sobic006G271100 Sobic004G296100--Sobic005G111600 Sobic004G296100--Sobic002G025300 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic007G169000 Sobic007G169000 Sobic004G296100--Sobic007G169000
Octagon: transcription factors


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