Gene annotation
Transcriptome id Sobic.002G206400.1
Synonym ADAP, Sb02g025080
Functional annotation similar to Os09g0423800 protein (PubMedID : 29862293)
AP2 domain containing protein, expressed
UniProt A0A1W0W536
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF20
NCBI CDD -
KEGG Orthology K09285; OVM, AP2-like factor, ANT lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT1G16060 : ARIA-interacting double AP2 domain protein
RAP-DB (Rice) LOC_Os06g05340.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009489 , Zm00025a047064 , Zm00025a005840
Brachypodium KQJ90293
Barley -
Wheat TraesCS5A02G221600 , TraesCS6A02G125700 , TraesCS6B02G153800 , TraesCS5D02G229400 , TraesCS5B02G220400 , TraesCS5B02G220400
Populus -


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cDNA sequences
Sobic.002G206400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
2 Sobic.009G070000 "GW5/qSW5(Ortholog in rice:Liu et al., 2017)"(PubMedID : 31659922)@IQ calmodulin-binding motif family protein, expressed -
3 Sobic.002G025300 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
4 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
6 Sobic.006G271100 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
7 Sobic.006G228100 glycosyl hydrolases family 16 protein, protein, expressed K08235: xyloglucan:xyloglucosyl transferase
8 Sobic.004G049800 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.002G408500 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
11 Sobic.008G144300 cytochrome P450, putative, expressed -
12 Sobic.001G049000 OsFBD9 - F-box and FBD domain containing protein, expressed -
13 Sobic.003G364700 expressed protein -
14 Sobic.009G229100 expressed protein -
15 Sobic.004G225400 PCF-like (ClassI) Subclade 2 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
16 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.010G136500 expressed protein -
19 Sobic.006G053800 LGC1, putative, expressed -
20 Sobic.001G267266 - -


Gene co-expression network
sample Sobic002G206400 Sobic002G206400 Sobic005G111600 Sobic005G111600 Sobic002G206400--Sobic005G111600 Sobic009G070000 Sobic009G070000 Sobic002G206400--Sobic009G070000 Sobic002G025300 Sobic002G025300 Sobic002G206400--Sobic002G025300 Sobic004G296100 Sobic004G296100 Sobic002G206400--Sobic004G296100 Sobic003G047300 Sobic003G047300 Sobic002G206400--Sobic003G047300 Sobic006G271100 Sobic006G271100 Sobic002G206400--Sobic006G271100 Sobic006G228100 Sobic006G228100 Sobic002G206400--Sobic006G228100 Sobic004G049800 Sobic004G049800 Sobic002G206400--Sobic004G049800 Sobic008G137500 Sobic008G137500 Sobic002G206400--Sobic008G137500 Sobic005G111600--Sobic009G070000 Sobic005G111600--Sobic008G137500 Sobic005G111600--Sobic003G047300 Sobic005G111600--Sobic006G271100 Sobic009G229100 Sobic009G229100 Sobic005G111600--Sobic009G229100 Sobic005G111600--Sobic006G228100 Sobic002G408500 Sobic002G408500 Sobic005G111600--Sobic002G408500 Sobic005G111600--Sobic002G206400 Sobic005G111600--Sobic004G296100 Sobic009G070000--Sobic006G271100 Sobic009G070000--Sobic003G047300 Sobic009G070000--Sobic009G229100 Sobic009G070000--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic009G070000--Sobic003G364700 Sobic009G070000--Sobic004G049800 Sobic009G070000--Sobic006G228100 Sobic001G049000 Sobic001G049000 Sobic009G070000--Sobic001G049000 Sobic001G511200 Sobic001G511200 Sobic009G070000--Sobic001G511200 Sobic002G280500 Sobic002G280500 Sobic002G025300--Sobic002G280500 Sobic005G147800 Sobic005G147800 Sobic002G025300--Sobic005G147800 Sobic002G025300--Sobic004G296100 Sobic010G096200 Sobic010G096200 Sobic002G025300--Sobic010G096200 Sobic007G142300 Sobic007G142300 Sobic002G025300--Sobic007G142300 Sobic001G265900 Sobic001G265900 Sobic002G025300--Sobic001G265900 Sobic002G025300--Sobic002G206400 Sobic002G397400 Sobic002G397400 Sobic002G025300--Sobic002G397400 Sobic002G045200 Sobic002G045200 Sobic002G025300--Sobic002G045200 Sobic004G296100--Sobic004G049800 Sobic004G296100--Sobic003G047300 Sobic004G296100--Sobic009G070000 Sobic004G296100--Sobic006G271100 Sobic004G296100--Sobic005G111600 Sobic004G296100--Sobic002G025300 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic007G169000 Sobic007G169000 Sobic004G296100--Sobic007G169000 Sobic003G047300--Sobic009G070000 Sobic003G047300--Sobic006G271100 Sobic003G047300--Sobic001G049000 Sobic003G047300--Sobic004G296100 Sobic003G047300--Sobic005G111600 Sobic003G047300--Sobic003G364700 Sobic010G145200 Sobic010G145200 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic003G047300--Sobic004G049800 Sobic006G271100--Sobic009G070000 Sobic006G271100--Sobic003G047300 Sobic006G271100--Sobic006G228100 Sobic001G399400 Sobic001G399400 Sobic006G271100--Sobic001G399400 Sobic006G271100--Sobic004G049800 Sobic006G271100--Sobic001G511200 Sobic003G184500 Sobic003G184500 Sobic006G271100--Sobic003G184500 Sobic006G271100--Sobic009G229100 Sobic002G219500 Sobic002G219500 Sobic006G271100--Sobic002G219500 Sobic001G530300 Sobic001G530300 Sobic006G228100--Sobic001G530300 Sobic004G225400 Sobic004G225400 Sobic006G228100--Sobic004G225400 Sobic006G228100--Sobic006G271100 Sobic006G228100--Sobic009G070000 Sobic006G228100--Sobic005G111600 Sobic002G004500 Sobic002G004500 Sobic006G228100--Sobic002G004500 Sobic010G246500 Sobic010G246500 Sobic006G228100--Sobic010G246500 Sobic006G228100--Sobic001G399400 Sobic006G228100--Sobic008G137500 Sobic004G049800--Sobic004G296100 Sobic004G049800--Sobic006G271100 Sobic004G049800--Sobic009G070000 Sobic004G049800--Sobic003G047300 Sobic001G430000 Sobic001G430000 Sobic004G049800--Sobic001G430000 Sobic004G049800--Sobic001G511200 Sobic003G023666 Sobic003G023666 Sobic004G049800--Sobic003G023666 Sobic008G127200 Sobic008G127200 Sobic004G049800--Sobic008G127200 Sobic004G049800--Sobic003G364700 Sobic010G191100 Sobic010G191100 Sobic008G137500--Sobic010G191100 Sobic008G137500--Sobic005G111600 Sobic008G137500--Sobic002G408500 Sobic008G137500--Sobic009G229100 Sobic008G137500--Sobic006G228100 Sobic008G137500--Sobic009G070000 Sobic004G155900 Sobic004G155900 Sobic008G137500--Sobic004G155900 Sobic008G137500--Sobic010G246500 Sobic002G154300 Sobic002G154300 Sobic008G137500--Sobic002G154300
Octagon: transcription factors


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