Gene annotation
Transcriptome id Sobic.006G238000.1
Synonym Sb06g030490
Functional annotation LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Y908
Pfam PF14547
Panther DB PTHR31731 PTHR31731:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G10940 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os06g07220.1 : LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a057189 , Zm00025a009565
Brachypodium -
Barley -
Wheat TraesCS2A02G518100
Populus -


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cDNA sequences
Sobic.006G238000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G084200 fasciclin domain containing protein, expressed -
2 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.007G127600 transferase family protein, putative, expressed -
4 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
5 Sobic.009G059100 Cupin domain containing protein, expressed -
6 Sobic.001G427000 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
7 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.001G366500 cytochrome P450, putative, expressed -
10 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
11 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
12 Sobic.004G231800 ribosomal protein L29, putative, expressed K02904: RP-L29, large subunit ribosomal protein L29
13 Sobic.010G233800 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
14 Sobic.002G020000 wax synthase, putative, expressed -
15 Sobic.002G020100 chalcone synthase, putative, expressed -
16 Sobic.004G291500 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.003G132600 plastid-specific 50S ribosomal protein 5, chloroplast precursor, putative, expressed K19034: 50S ribosomal protein 5
18 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
20 Sobic.005G056201 - -


Gene co-expression network
sample Sobic006G238000 Sobic006G238000 Sobic008G084200 Sobic008G084200 Sobic006G238000--Sobic008G084200 Sobic004G001200 Sobic004G001200 Sobic006G238000--Sobic004G001200 Sobic007G127600 Sobic007G127600 Sobic006G238000--Sobic007G127600 Sobic001G076500 Sobic001G076500 Sobic006G238000--Sobic001G076500 Sobic009G059100 Sobic009G059100 Sobic006G238000--Sobic009G059100 Sobic001G427000 Sobic001G427000 Sobic006G238000--Sobic001G427000 Sobic006G172700 Sobic006G172700 Sobic006G238000--Sobic006G172700 Sobic002G280500 Sobic002G280500 Sobic006G238000--Sobic002G280500 Sobic001G366500 Sobic001G366500 Sobic006G238000--Sobic001G366500 Sobic008G084200--Sobic006G238000 Sobic008G084200--Sobic001G076500 Sobic008G084200--Sobic007G127600 Sobic004G231800 Sobic004G231800 Sobic008G084200--Sobic004G231800 Sobic002G020000 Sobic002G020000 Sobic008G084200--Sobic002G020000 Sobic010G233800 Sobic010G233800 Sobic008G084200--Sobic010G233800 Sobic008G084200--Sobic001G427000 Sobic008G084200--Sobic001G366500 Sobic002G415400 Sobic002G415400 Sobic008G084200--Sobic002G415400 Sobic004G001200--Sobic006G238000 Sobic006G001400 Sobic006G001400 Sobic004G001200--Sobic006G001400 Sobic004G001200--Sobic009G059100 Sobic004G291500 Sobic004G291500 Sobic004G001200--Sobic004G291500 Sobic005G020200 Sobic005G020200 Sobic004G001200--Sobic005G020200 Sobic004G001200--Sobic006G172700 Sobic005G196500 Sobic005G196500 Sobic004G001200--Sobic005G196500 Sobic004G300800 Sobic004G300800 Sobic004G001200--Sobic004G300800 Sobic002G020100 Sobic002G020100 Sobic004G001200--Sobic002G020100 Sobic003G114200 Sobic003G114200 Sobic007G127600--Sobic003G114200 Sobic001G541300 Sobic001G541300 Sobic007G127600--Sobic001G541300 Sobic007G170800 Sobic007G170800 Sobic007G127600--Sobic007G170800 Sobic002G416950 Sobic002G416950 Sobic007G127600--Sobic002G416950 Sobic004G249400 Sobic004G249400 Sobic007G127600--Sobic004G249400 Sobic004G060700 Sobic004G060700 Sobic007G127600--Sobic004G060700 Sobic007G127600--Sobic001G076500 Sobic002G141100 Sobic002G141100 Sobic007G127600--Sobic002G141100 Sobic006G238100 Sobic006G238100 Sobic007G127600--Sobic006G238100 Sobic001G076500--Sobic001G427000 Sobic001G027600 Sobic001G027600 Sobic001G076500--Sobic001G027600 Sobic001G453300 Sobic001G453300 Sobic001G076500--Sobic001G453300 Sobic001G076500--Sobic010G233800 Sobic001G383900 Sobic001G383900 Sobic001G076500--Sobic001G383900 Sobic003G393800 Sobic003G393800 Sobic001G076500--Sobic003G393800 Sobic003G132600 Sobic003G132600 Sobic001G076500--Sobic003G132600 Sobic004G044000 Sobic004G044000 Sobic001G076500--Sobic004G044000 Sobic003G246400 Sobic003G246400 Sobic001G076500--Sobic003G246400 Sobic009G059100--Sobic006G172700 Sobic003G157500 Sobic003G157500 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic001G003600 Sobic001G003600 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic005G056201 Sobic005G056201 Sobic009G059100--Sobic005G056201 Sobic003G096100 Sobic003G096100 Sobic009G059100--Sobic003G096100 Sobic001G435600 Sobic001G435600 Sobic009G059100--Sobic001G435600 Sobic001G427000--Sobic001G076500 Sobic001G427000--Sobic001G027600 Sobic001G427000--Sobic001G453300 Sobic001G427000--Sobic003G132600 Sobic001G427000--Sobic010G233800 Sobic003G256200 Sobic003G256200 Sobic001G427000--Sobic003G256200 Sobic001G427000--Sobic003G393800 Sobic001G427000--Sobic003G246400 Sobic001G427000--Sobic001G383900 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic006G172700--Sobic009G115050 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic002G280500--Sobic006G238000 Sobic002G280500--Sobic004G291500 Sobic002G280500--Sobic008G084200 Sobic001G379100 Sobic001G379100 Sobic002G280500--Sobic001G379100 Sobic002G280500--Sobic009G059100 Sobic002G025300 Sobic002G025300 Sobic002G280500--Sobic002G025300 Sobic010G124200 Sobic010G124200 Sobic002G280500--Sobic010G124200 Sobic002G280500--Sobic006G172700 Sobic002G280500--Sobic004G001200 Sobic001G366500--Sobic003G096100 Sobic001G366500--Sobic001G003600 Sobic001G366500--Sobic007G127600 Sobic001G366500--Sobic007G170800 Sobic001G366500--Sobic001G435600 Sobic001G366500--Sobic006G172700 Sobic001G366500--Sobic004G060700 Sobic003G058600 Sobic003G058600 Sobic001G366500--Sobic003G058600 Sobic001G366500--Sobic009G115050
Octagon: transcription factors


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