Gene annotation
Transcriptome id Sobic.002G025300.1
Synonym Sb02g002300, SbEPFL4, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt A0A1B6Q8U7
Pfam -
Panther DB PTHR33109 PTHR33109:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37810 : -
RAP-DB (Rice) LOC_Os07g04020.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.004G296100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G096200 expressed protein -
5 Sobic.007G142300 expressed protein -
6 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.002G206400 similar to Os09g0423800 protein(PubMedID : 29862293)@AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
9 Sobic.002G045200 protein kinase, putative, expressed -
10 Sobic.001G389600 expressed protein -
11 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
12 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.003G229700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
14 Sobic.005G111600 CRP7 - Cysteine-rich family protein precursor, expressed -
15 Sobic.010G165100 expressed protein -
16 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.008G084200 fasciclin domain containing protein, expressed -
18 Sobic.008G024300 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.005G209900 expressed protein -


Gene co-expression network
sample Sobic002G025300 Sobic002G025300 Sobic002G280500 Sobic002G280500 Sobic002G025300--Sobic002G280500 Sobic005G147800 Sobic005G147800 Sobic002G025300--Sobic005G147800 Sobic004G296100 Sobic004G296100 Sobic002G025300--Sobic004G296100 Sobic010G096200 Sobic010G096200 Sobic002G025300--Sobic010G096200 Sobic007G142300 Sobic007G142300 Sobic002G025300--Sobic007G142300 Sobic001G265900 Sobic001G265900 Sobic002G025300--Sobic001G265900 Sobic002G206400 Sobic002G206400 Sobic002G025300--Sobic002G206400 Sobic002G397400 Sobic002G397400 Sobic002G025300--Sobic002G397400 Sobic002G045200 Sobic002G045200 Sobic002G025300--Sobic002G045200 Sobic006G238000 Sobic006G238000 Sobic002G280500--Sobic006G238000 Sobic004G291500 Sobic004G291500 Sobic002G280500--Sobic004G291500 Sobic008G084200 Sobic008G084200 Sobic002G280500--Sobic008G084200 Sobic001G379100 Sobic001G379100 Sobic002G280500--Sobic001G379100 Sobic009G059100 Sobic009G059100 Sobic002G280500--Sobic009G059100 Sobic002G280500--Sobic002G025300 Sobic010G124200 Sobic010G124200 Sobic002G280500--Sobic010G124200 Sobic006G172700 Sobic006G172700 Sobic002G280500--Sobic006G172700 Sobic004G001200 Sobic004G001200 Sobic002G280500--Sobic004G001200 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic010G107200 Sobic010G107200 Sobic005G147800--Sobic010G107200 Sobic005G147800--Sobic010G124200 Sobic005G209900 Sobic005G209900 Sobic005G147800--Sobic005G209900 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700 Sobic004G049800 Sobic004G049800 Sobic004G296100--Sobic004G049800 Sobic003G047300 Sobic003G047300 Sobic004G296100--Sobic003G047300 Sobic009G070000 Sobic009G070000 Sobic004G296100--Sobic009G070000 Sobic006G271100 Sobic006G271100 Sobic004G296100--Sobic006G271100 Sobic005G111600 Sobic005G111600 Sobic004G296100--Sobic005G111600 Sobic004G296100--Sobic002G025300 Sobic004G296100--Sobic002G206400 Sobic008G144300 Sobic008G144300 Sobic004G296100--Sobic008G144300 Sobic007G169000 Sobic007G169000 Sobic004G296100--Sobic007G169000 Sobic010G096200--Sobic001G379100 Sobic010G096200--Sobic005G147800 Sobic001G389600 Sobic001G389600 Sobic010G096200--Sobic001G389600 Sobic001G164500 Sobic001G164500 Sobic010G096200--Sobic001G164500 Sobic010G096200--Sobic007G142300 Sobic010G096200--Sobic010G107200 Sobic010G165100 Sobic010G165100 Sobic010G096200--Sobic010G165100 Sobic006G233600 Sobic006G233600 Sobic010G096200--Sobic006G233600 Sobic002G164700 Sobic002G164700 Sobic010G096200--Sobic002G164700 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic007G142300--Sobic001G265900 Sobic005G196500 Sobic005G196500 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic007G142300--Sobic010G124200 Sobic006G032800 Sobic006G032800 Sobic007G142300--Sobic006G032800 Sobic001G265900--Sobic005G147800 Sobic010G196400 Sobic010G196400 Sobic001G265900--Sobic010G196400 Sobic001G250200 Sobic001G250200 Sobic001G265900--Sobic001G250200 Sobic001G066900 Sobic001G066900 Sobic001G265900--Sobic001G066900 Sobic001G265900--Sobic007G142300 Sobic001G265900--Sobic002G397400 Sobic001G265900--Sobic010G107200 Sobic001G307300 Sobic001G307300 Sobic001G265900--Sobic001G307300 Sobic008G082400 Sobic008G082400 Sobic001G265900--Sobic008G082400 Sobic002G206400--Sobic005G111600 Sobic002G206400--Sobic009G070000 Sobic002G206400--Sobic002G025300 Sobic002G206400--Sobic004G296100 Sobic002G206400--Sobic003G047300 Sobic002G206400--Sobic006G271100 Sobic006G228100 Sobic006G228100 Sobic002G206400--Sobic006G228100 Sobic002G206400--Sobic004G049800 Sobic008G137500 Sobic008G137500 Sobic002G206400--Sobic008G137500 Sobic002G397400--Sobic005G147800 Sobic002G397400--Sobic005G212400 Sobic002G397400--Sobic007G142300 Sobic002G397400--Sobic010G124200 Sobic002G397400--Sobic001G265900 Sobic002G397400--Sobic010G107200 Sobic002G397400--Sobic001G127700 Sobic002G397400--Sobic005G209900 Sobic002G397400--Sobic001G307300 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G311000 Sobic002G311000 Sobic002G045200--Sobic002G311000 Sobic002G142500 Sobic002G142500 Sobic002G045200--Sobic002G142500
Octagon: transcription factors


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