Gene annotation
Transcriptome id Sobic.003G229700.1
Synonym ATGPAT1, GPAT1, Sb03g028780
Functional annotation glycerol-3-phosphate acyltransferase, putative, expressed
UniProt C5XEG2
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF24
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G06520 : glycerol-3-phosphate acyltransferase 1
RAP-DB (Rice) LOC_Os01g44069.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a038631 , Zm00025a028322 , Zm00025a008905 , Zm00025a015955
Brachypodium KQK12301 , KQK08862
Barley HORVU3Hr1G056830.3 , HORVU3Hr1G056830.2 , HORVU3Hr1G056830.1 , HORVU3Hr1G056830.4 , HORVU3Hr1G084990.2 , HORVU3Hr1G084990.1 , HORVU2Hr1G081970.3 , HORVU2Hr1G081970.2 , HORVU2Hr1G081970.1
Wheat TraesCS4A02G361400 , TraesCS1A02G283100 , TraesCS3D02G225300 , TraesCS3D02G361300 , TraesCS3A02G368400 , TraesCS5B02G511500 , TraesCS3D02G333200 , TraesCS3B02G371300 , TraesCS3A02G339700 , TraesCS1B02G292200 , TraesCS3B02G257000 , TraesCS3B02G400000 , TraesCS4B02G066500 , TraesCS3A02G227400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036500 AGC_PVPK_like_kin82y.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.003G287000 BURP domain containing protein, expressed -
3 Sobic.007G142300 expressed protein -
4 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
5 Sobic.005G227000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic protease, putative, expressed -
6 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
7 Sobic.010G116500 expressed protein -
8 Sobic.006G074100 ctr copper transporter family protein, putative, expressed -
9 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
11 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
12 Sobic.004G343000 RNA recognition motif containing protein, putative, expressed -
13 Sobic.005G218700 NB-ARC domain containing protein, expressed -
14 Sobic.002G025300 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.004G335500 "P-(S)-hydroxymandelonitrile lyase, up-regulated under drought stress "(PubMedID : 24655390)@OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed -
16 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.010G096200 expressed protein -
18 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
19 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.008G024300 tyrosine protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G229700 Sobic003G229700 Sobic005G036500 Sobic005G036500 Sobic003G229700--Sobic005G036500 Sobic003G287000 Sobic003G287000 Sobic003G229700--Sobic003G287000 Sobic007G142300 Sobic007G142300 Sobic003G229700--Sobic007G142300 Sobic003G095000 Sobic003G095000 Sobic003G229700--Sobic003G095000 Sobic005G227000 Sobic005G227000 Sobic003G229700--Sobic005G227000 Sobic008G189500 Sobic008G189500 Sobic003G229700--Sobic008G189500 Sobic010G116500 Sobic010G116500 Sobic003G229700--Sobic010G116500 Sobic006G074100 Sobic006G074100 Sobic003G229700--Sobic006G074100 Sobic005G147800 Sobic005G147800 Sobic003G229700--Sobic005G147800 Sobic005G036500--Sobic003G287000 Sobic005G036500--Sobic003G229700 Sobic005G036500--Sobic008G189500 Sobic001G472000 Sobic001G472000 Sobic005G036500--Sobic001G472000 Sobic003G007800 Sobic003G007800 Sobic005G036500--Sobic003G007800 Sobic002G128600 Sobic002G128600 Sobic005G036500--Sobic002G128600 Sobic001G531000 Sobic001G531000 Sobic005G036500--Sobic001G531000 Sobic001G363700 Sobic001G363700 Sobic005G036500--Sobic001G363700 Sobic005G218700 Sobic005G218700 Sobic005G036500--Sobic005G218700 Sobic008G030700 Sobic008G030700 Sobic003G287000--Sobic008G030700 Sobic001G535600 Sobic001G535600 Sobic003G287000--Sobic001G535600 Sobic005G190800 Sobic005G190800 Sobic003G287000--Sobic005G190800 Sobic003G287000--Sobic001G363700 Sobic003G287000--Sobic002G128600 Sobic006G175700 Sobic006G175700 Sobic003G287000--Sobic006G175700 Sobic001G249500 Sobic001G249500 Sobic003G287000--Sobic001G249500 Sobic003G287000--Sobic005G036500 Sobic003G287000--Sobic003G007800 Sobic007G142300--Sobic005G147800 Sobic010G107200 Sobic010G107200 Sobic007G142300--Sobic010G107200 Sobic002G397400 Sobic002G397400 Sobic007G142300--Sobic002G397400 Sobic005G209900 Sobic005G209900 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic005G196500 Sobic005G196500 Sobic007G142300--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic007G142300--Sobic006G233600 Sobic010G124200 Sobic010G124200 Sobic007G142300--Sobic010G124200 Sobic006G032800 Sobic006G032800 Sobic007G142300--Sobic006G032800 Sobic004G249400 Sobic004G249400 Sobic003G095000--Sobic004G249400 Sobic004G044000 Sobic004G044000 Sobic003G095000--Sobic004G044000 Sobic001G076500 Sobic001G076500 Sobic003G095000--Sobic001G076500 Sobic007G127600 Sobic007G127600 Sobic003G095000--Sobic007G127600 Sobic001G453200 Sobic001G453200 Sobic003G095000--Sobic001G453200 Sobic004G017200 Sobic004G017200 Sobic003G095000--Sobic004G017200 Sobic003G095000--Sobic010G116500 Sobic001G427000 Sobic001G427000 Sobic003G095000--Sobic001G427000 Sobic002G343700 Sobic002G343700 Sobic003G095000--Sobic002G343700 Sobic005G227000--Sobic005G209900 Sobic005G227000--Sobic007G142300 Sobic005G227000--Sobic005G196500 Sobic005G227000--Sobic010G107200 Sobic005G227000--Sobic005G147800 Sobic006G001400 Sobic006G001400 Sobic005G227000--Sobic006G001400 Sobic005G227050 Sobic005G227050 Sobic005G227000--Sobic005G227050 Sobic005G227000--Sobic006G233600 Sobic005G227000--Sobic002G397400 Sobic008G189500--Sobic003G007800 Sobic008G189500--Sobic001G472000 Sobic001G255300 Sobic001G255300 Sobic008G189500--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic008G189500--Sobic005G029400 Sobic009G070600 Sobic009G070600 Sobic008G189500--Sobic009G070600 Sobic004G328900 Sobic004G328900 Sobic008G189500--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic003G328200 Sobic003G328200 Sobic010G116500--Sobic003G328200 Sobic001G240000 Sobic001G240000 Sobic010G116500--Sobic001G240000 Sobic010G022100 Sobic010G022100 Sobic010G116500--Sobic010G022100 Sobic001G527100 Sobic001G527100 Sobic010G116500--Sobic001G527100 Sobic003G014100 Sobic003G014100 Sobic010G116500--Sobic003G014100 Sobic006G248200 Sobic006G248200 Sobic010G116500--Sobic006G248200 Sobic003G386300 Sobic003G386300 Sobic010G116500--Sobic003G386300 Sobic002G198600 Sobic002G198600 Sobic010G116500--Sobic002G198600 Sobic001G411300 Sobic001G411300 Sobic010G116500--Sobic001G411300 Sobic006G074100--Sobic002G343700 Sobic007G136600 Sobic007G136600 Sobic006G074100--Sobic007G136600 Sobic004G309400 Sobic004G309400 Sobic006G074100--Sobic004G309400 Sobic006G074100--Sobic001G531000 Sobic006G074100--Sobic003G229700 Sobic006G074100--Sobic003G095000 Sobic006G074100--Sobic010G116500 Sobic009G206400 Sobic009G206400 Sobic006G074100--Sobic009G206400 Sobic004G343000 Sobic004G343000 Sobic006G074100--Sobic004G343000 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic005G147800--Sobic010G107200 Sobic005G147800--Sobic010G124200 Sobic005G147800--Sobic005G209900 Sobic010G096200 Sobic010G096200 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700
Octagon: transcription factors


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