Gene annotation
Transcriptome id Sobic.005G218700.2,Sobic.005G218700.1
Synonym RCY1, RPP8, HRT
Functional annotation NB-ARC domain containing protein, expressed
UniProt A0A1B6PTZ6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF576
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43470 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os10g04180.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055560
Brachypodium KQK12047 , KQJ87635
Barley HORVU3Hr1G002150.1 , HORVU3Hr1G002150.3 , HORVU3Hr1G002150.2 , HORVU3Hr1G002150.5 , HORVU3Hr1G002150.4 , HORVU3Hr1G002150.7 , HORVU3Hr1G002150.6 , HORVU3Hr1G002150.9 , HORVU3Hr1G002150.8 , HORVU3Hr1G002150.11 , HORVU3Hr1G002150.10 , HORVU3Hr1G002150.12
Wheat TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS1B02G420400 , TraesCS4A02G487300 , TraesCS4A02G487300 , TraesCS5B02G540300 , TraesCS7A02G006200 , TraesCS7A02G004400 , TraesCS4A02G490900 , TraesCS4A02G493300 , TraesCS7D02G007600 , TraesCSU02G042600 , TraesCS2D02G042200 , TraesCS5B02G473500 , TraesCS5B02G473500 , TraesCS4B02G372900 , TraesCS3A02G014600 , TraesCS5D02G548500 , TraesCS7D02G006700 , TraesCS3D02G012600 , TraesCS3D02G012600 , TraesCSU02G154500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
2 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
5 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
6 Sobic.003G068300 transferase family protein, putative, expressed -
7 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
8 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
9 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
10 Sobic.007G127600 transferase family protein, putative, expressed -
11 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
12 Sobic.004G328900 expressed protein -
13 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.005G029400 strictosidine synthase, putative, expressed -
15 Sobic.010G120200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
16 Sobic.005G036500 AGC_PVPK_like_kin82y.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
17 Sobic.003G095000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G453200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.003G317800 lysM domain containing protein, putative -
20 Sobic.005G218201 - -


Gene co-expression network
sample Sobic005G218700 Sobic005G218700 Sobic003G114200 Sobic003G114200 Sobic005G218700--Sobic003G114200 Sobic008G189500 Sobic008G189500 Sobic005G218700--Sobic008G189500 Sobic005G218600 Sobic005G218600 Sobic005G218700--Sobic005G218600 Sobic001G472000 Sobic001G472000 Sobic005G218700--Sobic001G472000 Sobic001G255300 Sobic001G255300 Sobic005G218700--Sobic001G255300 Sobic003G068300 Sobic003G068300 Sobic005G218700--Sobic003G068300 Sobic008G163200 Sobic008G163200 Sobic005G218700--Sobic008G163200 Sobic009G070600 Sobic009G070600 Sobic005G218700--Sobic009G070600 Sobic007G170800 Sobic007G170800 Sobic005G218700--Sobic007G170800 Sobic003G114200--Sobic007G170800 Sobic007G127600 Sobic007G127600 Sobic003G114200--Sobic007G127600 Sobic001G541300 Sobic001G541300 Sobic003G114200--Sobic001G541300 Sobic002G141100 Sobic002G141100 Sobic003G114200--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic003G114200--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic003G114200--Sobic002G416950 Sobic003G114200--Sobic008G163200 Sobic007G009600 Sobic007G009600 Sobic003G114200--Sobic007G009600 Sobic007G185100 Sobic007G185100 Sobic003G114200--Sobic007G185100 Sobic003G007800 Sobic003G007800 Sobic008G189500--Sobic003G007800 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic005G029400 Sobic005G029400 Sobic008G189500--Sobic005G029400 Sobic008G189500--Sobic009G070600 Sobic004G328900 Sobic004G328900 Sobic008G189500--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic002G128600 Sobic002G128600 Sobic008G189500--Sobic002G128600 Sobic005G218201 Sobic005G218201 Sobic005G218600--Sobic005G218201 Sobic004G038300 Sobic004G038300 Sobic005G218600--Sobic004G038300 Sobic005G218600--Sobic001G255300 Sobic005G218600--Sobic001G379300 Sobic006G238100 Sobic006G238100 Sobic005G218600--Sobic006G238100 Sobic004G044200 Sobic004G044200 Sobic005G218600--Sobic004G044200 Sobic002G209800 Sobic002G209800 Sobic005G218600--Sobic002G209800 Sobic005G218600--Sobic008G163200 Sobic005G218600--Sobic003G068300 Sobic001G472000--Sobic008G189500 Sobic001G472000--Sobic003G007800 Sobic001G472000--Sobic005G029400 Sobic009G161100 Sobic009G161100 Sobic001G472000--Sobic009G161100 Sobic001G472000--Sobic009G070600 Sobic001G472000--Sobic001G255300 Sobic001G315200 Sobic001G315200 Sobic001G472000--Sobic001G315200 Sobic001G472000--Sobic001G541300 Sobic004G249400 Sobic004G249400 Sobic001G472000--Sobic004G249400 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic001G255300--Sobic008G189500 Sobic001G255300--Sobic003G068300 Sobic002G415300 Sobic002G415300 Sobic003G068300--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic003G068300--Sobic002G415400 Sobic003G068300--Sobic008G163200 Sobic003G068300--Sobic001G255300 Sobic009G206000 Sobic009G206000 Sobic003G068300--Sobic009G206000 Sobic003G068300--Sobic004G060700 Sobic003G068300--Sobic006G238100 Sobic003G068300--Sobic002G416950 Sobic003G068300--Sobic004G328900 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic008G163200--Sobic002G415400 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic008G163200--Sobic003G068300 Sobic008G163200--Sobic001G379300 Sobic008G163200--Sobic001G255300 Sobic001G435600 Sobic001G435600 Sobic008G163200--Sobic001G435600 Sobic009G070700 Sobic009G070700 Sobic009G070600--Sobic009G070700 Sobic009G070600--Sobic001G255300 Sobic009G070600--Sobic005G029400 Sobic009G070600--Sobic008G189500 Sobic009G070600--Sobic003G007800 Sobic009G070600--Sobic004G328900 Sobic002G207900 Sobic002G207900 Sobic009G070600--Sobic002G207900 Sobic009G070600--Sobic001G472000 Sobic009G070600--Sobic001G379300 Sobic007G170800--Sobic004G060700 Sobic007G170800--Sobic003G114200 Sobic007G170800--Sobic007G009600 Sobic007G170800--Sobic002G416950 Sobic007G170800--Sobic008G163200 Sobic007G170800--Sobic001G435600 Sobic007G170800--Sobic002G415300 Sobic007G170800--Sobic001G541300 Sobic007G170800--Sobic001G379300
Octagon: transcription factors


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