Gene annotation
Transcriptome id Sobic.005G227000.1
Synonym Sb05g027510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
aspartic protease, putative, expressed
UniProt A0A1Z5RK94
Pfam PF14541 PF14543
Panther DB PTHR13683 PTHR13683:SF330
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os06g02780.1 : aspartic protease, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK19838 , KQK19627
Barley HORVU7Hr1G009380.1 , HORVU7Hr1G009380.3 , HORVU7Hr1G009380.2 , HORVU7Hr1G009380.5 , HORVU7Hr1G009380.4 , HORVU7Hr1G009380.7 , HORVU7Hr1G009380.6 , HORVU7Hr1G009380.9 , HORVU7Hr1G009380.8
Wheat TraesCS7D02G048000 , TraesCS4A02G439400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G209900 expressed protein -
2 Sobic.007G142300 expressed protein -
3 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
4 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
7 Sobic.005G227050 - -
8 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
9 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
10 Sobic.010G124200 expressed protein -
11 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.009G154100 expressed protein -
13 Sobic.002G246000 expressed protein -
14 Sobic.003G229700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
15 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.009G083300 white-brown complex homolog protein 12, putative, expressed -
17 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
18 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.008G143600 expressed protein -
20 Sobic.010G165100 expressed protein -


Gene co-expression network
sample Sobic005G227000 Sobic005G227000 Sobic005G209900 Sobic005G209900 Sobic005G227000--Sobic005G209900 Sobic007G142300 Sobic007G142300 Sobic005G227000--Sobic007G142300 Sobic005G196500 Sobic005G196500 Sobic005G227000--Sobic005G196500 Sobic010G107200 Sobic010G107200 Sobic005G227000--Sobic010G107200 Sobic005G147800 Sobic005G147800 Sobic005G227000--Sobic005G147800 Sobic006G001400 Sobic006G001400 Sobic005G227000--Sobic006G001400 Sobic005G227050 Sobic005G227050 Sobic005G227000--Sobic005G227050 Sobic006G233600 Sobic006G233600 Sobic005G227000--Sobic006G233600 Sobic002G397400 Sobic002G397400 Sobic005G227000--Sobic002G397400 Sobic005G209900--Sobic010G107200 Sobic005G209900--Sobic005G196500 Sobic009G154100 Sobic009G154100 Sobic005G209900--Sobic009G154100 Sobic005G209900--Sobic005G227050 Sobic005G209900--Sobic006G233600 Sobic007G012800 Sobic007G012800 Sobic005G209900--Sobic007G012800 Sobic005G209900--Sobic007G142300 Sobic005G209900--Sobic005G147800 Sobic002G179700 Sobic002G179700 Sobic005G209900--Sobic002G179700 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic010G124200 Sobic010G124200 Sobic007G142300--Sobic010G124200 Sobic006G032800 Sobic006G032800 Sobic007G142300--Sobic006G032800 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G196500--Sobic005G209900 Sobic005G196500--Sobic010G107200 Sobic005G196500--Sobic005G227050 Sobic005G196500--Sobic007G142300 Sobic004G001200 Sobic004G001200 Sobic005G196500--Sobic004G001200 Sobic003G333000 Sobic003G333000 Sobic005G196500--Sobic003G333000 Sobic004G291500 Sobic004G291500 Sobic005G196500--Sobic004G291500 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic010G107200--Sobic005G147800 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic005G147800--Sobic010G107200 Sobic005G147800--Sobic010G124200 Sobic005G147800--Sobic005G209900 Sobic010G096200 Sobic010G096200 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700 Sobic006G001400--Sobic005G196500 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic006G001400--Sobic005G020200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic005G227050--Sobic005G209900 Sobic005G227050--Sobic005G196500 Sobic005G227050--Sobic009G154100 Sobic005G227050--Sobic002G179700 Sobic001G356400 Sobic001G356400 Sobic005G227050--Sobic001G356400 Sobic005G227050--Sobic010G107200 Sobic005G227050--Sobic006G001400 Sobic007G103800 Sobic007G103800 Sobic005G227050--Sobic007G103800 Sobic007G123200 Sobic007G123200 Sobic005G227050--Sobic007G123200 Sobic006G233600--Sobic005G196500 Sobic006G233600--Sobic010G107200 Sobic006G233600--Sobic001G478100 Sobic006G233600--Sobic005G209900 Sobic006G233600--Sobic006G032800 Sobic006G233600--Sobic006G001400 Sobic006G233600--Sobic007G142300 Sobic006G233600--Sobic009G154100 Sobic006G233600--Sobic007G012800 Sobic002G397400--Sobic005G147800 Sobic002G397400--Sobic005G212400 Sobic002G397400--Sobic007G142300 Sobic002G397400--Sobic010G124200 Sobic002G397400--Sobic001G265900 Sobic002G397400--Sobic010G107200 Sobic002G397400--Sobic001G127700 Sobic002G397400--Sobic005G209900 Sobic001G307300 Sobic001G307300 Sobic002G397400--Sobic001G307300
Octagon: transcription factors


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