Gene annotation
Transcriptome id Sobic.001G265900.1
Synonym Sb01g025970, PRP4, ATPRP4,
Functional annotation "similar to Proline-rich protein precursor, structural protein of cell walls in plants" (PubMedID : 24655390)
similar to Proline-rich protein precursor (PubMedID : 24655390)
POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed
UniProt C5WP14
Pfam PF01190
Panther DB PTHR33935 PTHR33935:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38770 : proline-rich protein 4
RAP-DB (Rice) LOC_Os10g05980.1 : POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a003795
Brachypodium -
Barley -
Wheat TraesCS2A02G062100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.010G196400 expressed protein -
3 Sobic.001G250200 glycerol-3-phosphate acyltransferase, putative, expressed -
4 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
5 Sobic.007G142300 expressed protein -
6 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
7 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
9 Sobic.008G082400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
10 Sobic.005G209900 expressed protein -
11 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.009G031400 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
13 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
14 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
15 Sobic.010G124200 expressed protein -
16 Sobic.001G389600 expressed protein -
17 Sobic.007G107950 - -
18 Sobic.010G096200 expressed protein -
19 Sobic.002G246000 expressed protein -
20 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -


Gene co-expression network
sample Sobic001G265900 Sobic001G265900 Sobic005G147800 Sobic005G147800 Sobic001G265900--Sobic005G147800 Sobic010G196400 Sobic010G196400 Sobic001G265900--Sobic010G196400 Sobic001G250200 Sobic001G250200 Sobic001G265900--Sobic001G250200 Sobic001G066900 Sobic001G066900 Sobic001G265900--Sobic001G066900 Sobic007G142300 Sobic007G142300 Sobic001G265900--Sobic007G142300 Sobic002G397400 Sobic002G397400 Sobic001G265900--Sobic002G397400 Sobic010G107200 Sobic010G107200 Sobic001G265900--Sobic010G107200 Sobic001G307300 Sobic001G307300 Sobic001G265900--Sobic001G307300 Sobic008G082400 Sobic008G082400 Sobic001G265900--Sobic008G082400 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic005G147800--Sobic010G107200 Sobic010G124200 Sobic010G124200 Sobic005G147800--Sobic010G124200 Sobic005G209900 Sobic005G209900 Sobic005G147800--Sobic005G209900 Sobic010G096200 Sobic010G096200 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700 Sobic009G162800 Sobic009G162800 Sobic010G196400--Sobic009G162800 Sobic010G196400--Sobic001G066900 Sobic010G196400--Sobic001G265900 Sobic006G166800 Sobic006G166800 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic003G153400 Sobic003G153400 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic010G196400--Sobic001G250200 Sobic001G250200--Sobic001G265900 Sobic001G250200--Sobic010G196400 Sobic001G250200--Sobic005G147800 Sobic001G250200--Sobic001G066900 Sobic007G107950 Sobic007G107950 Sobic001G250200--Sobic007G107950 Sobic001G250200--Sobic010G107200 Sobic003G085200 Sobic003G085200 Sobic001G250200--Sobic003G085200 Sobic001G250200--Sobic007G142300 Sobic001G221200 Sobic001G221200 Sobic001G250200--Sobic001G221200 Sobic001G066900--Sobic010G196400 Sobic001G066900--Sobic001G265900 Sobic005G146300 Sobic005G146300 Sobic001G066900--Sobic005G146300 Sobic008G112200 Sobic008G112200 Sobic001G066900--Sobic008G112200 Sobic009G031400 Sobic009G031400 Sobic001G066900--Sobic009G031400 Sobic001G066900--Sobic001G250200 Sobic010G199700 Sobic010G199700 Sobic001G066900--Sobic010G199700 Sobic002G003200 Sobic002G003200 Sobic001G066900--Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic001G066900--Sobic003G352800 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic007G142300--Sobic001G265900 Sobic005G196500 Sobic005G196500 Sobic007G142300--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic007G142300--Sobic006G233600 Sobic007G142300--Sobic010G124200 Sobic006G032800 Sobic006G032800 Sobic007G142300--Sobic006G032800 Sobic002G397400--Sobic005G147800 Sobic002G397400--Sobic005G212400 Sobic002G397400--Sobic007G142300 Sobic002G397400--Sobic010G124200 Sobic002G397400--Sobic001G265900 Sobic002G397400--Sobic010G107200 Sobic002G397400--Sobic001G127700 Sobic002G397400--Sobic005G209900 Sobic002G397400--Sobic001G307300 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic009G154100 Sobic009G154100 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic010G107200--Sobic005G147800 Sobic009G119400 Sobic009G119400 Sobic001G307300--Sobic009G119400 Sobic001G336800 Sobic001G336800 Sobic001G307300--Sobic001G336800 Sobic001G307300--Sobic010G196400 Sobic001G307300--Sobic001G275600 Sobic009G215600 Sobic009G215600 Sobic001G307300--Sobic009G215600 Sobic001G307300--Sobic002G397400 Sobic002G351000 Sobic002G351000 Sobic001G307300--Sobic002G351000 Sobic001G307300--Sobic009G151000 Sobic001G307300--Sobic001G265900 Sobic008G082400--Sobic001G265900 Sobic004G168700 Sobic004G168700 Sobic008G082400--Sobic004G168700 Sobic008G082400--Sobic005G147800 Sobic008G082400--Sobic007G142300 Sobic009G161100 Sobic009G161100 Sobic008G082400--Sobic009G161100 Sobic010G165100 Sobic010G165100 Sobic008G082400--Sobic010G165100 Sobic009G055900 Sobic009G055900 Sobic008G082400--Sobic009G055900 Sobic008G082400--Sobic002G397400 Sobic008G082400--Sobic010G196400
Octagon: transcription factors


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