Gene annotation
Transcriptome id Sobic.001G250200.1
Synonym Sb01g022140, GPAT6, ATGPAT6
Functional annotation glycerol-3-phosphate acyltransferase, putative, expressed
UniProt C5WM55
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G38110 : glycerol-3-phosphate acyltransferase 6
RAP-DB (Rice) LOC_Os10g27330.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a018693 , Zm00025a008038 , Zm00025a006953 , Zm00025a000815
Brachypodium KQJ96681 , KQK23463 , KQK13340
Barley HORVU4Hr1G011110.4 , HORVU4Hr1G011110.5 , HORVU4Hr1G011110.2 , HORVU4Hr1G011110.3 , HORVU4Hr1G011110.1 , HORVU4Hr1G011110.6 , HORVU1Hr1G032150.8 , HORVU1Hr1G032150.9 , HORVU1Hr1G032150.1 , HORVU1Hr1G032150.3 , HORVU1Hr1G032150.4 , HORVU1Hr1G032150.5 , HORVU1Hr1G032150.6 , HORVU1Hr1G032150.7
Wheat TraesCS4D02G280800 , TraesCS4A02G021500 , TraesCS1A02G139200 , TraesCS2A02G015700 , TraesCS4A02G248400 , TraesCS1D02G132800 , TraesCS4D02G065400 , TraesCS1B02G149600 , TraesCS4B02G066500 , TraesCS4B02G282100
Populus -


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cDNA sequences
Sobic.001G250200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
2 Sobic.010G196400 expressed protein -
3 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
5 Sobic.007G107950 - -
6 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.003G085200 expressed protein -
8 Sobic.007G142300 expressed protein -
9 Sobic.001G221200 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
10 Sobic.002G397400 thiol protease SEN102 precursor, putative, expressed -
11 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
12 Sobic.003G383800 serine/threonine-protein kinase receptor precursor, putative, expressed -
13 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.008G082400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
15 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.010G096200 expressed protein -
17 Sobic.010G124200 expressed protein -
18 Sobic.002G045200 protein kinase, putative, expressed -
19 Sobic.009G031400 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
20 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -


Gene co-expression network
sample Sobic001G250200 Sobic001G250200 Sobic001G265900 Sobic001G265900 Sobic001G250200--Sobic001G265900 Sobic010G196400 Sobic010G196400 Sobic001G250200--Sobic010G196400 Sobic005G147800 Sobic005G147800 Sobic001G250200--Sobic005G147800 Sobic001G066900 Sobic001G066900 Sobic001G250200--Sobic001G066900 Sobic007G107950 Sobic007G107950 Sobic001G250200--Sobic007G107950 Sobic010G107200 Sobic010G107200 Sobic001G250200--Sobic010G107200 Sobic003G085200 Sobic003G085200 Sobic001G250200--Sobic003G085200 Sobic007G142300 Sobic007G142300 Sobic001G250200--Sobic007G142300 Sobic001G221200 Sobic001G221200 Sobic001G250200--Sobic001G221200 Sobic001G265900--Sobic005G147800 Sobic001G265900--Sobic010G196400 Sobic001G265900--Sobic001G250200 Sobic001G265900--Sobic001G066900 Sobic001G265900--Sobic007G142300 Sobic002G397400 Sobic002G397400 Sobic001G265900--Sobic002G397400 Sobic001G265900--Sobic010G107200 Sobic001G307300 Sobic001G307300 Sobic001G265900--Sobic001G307300 Sobic008G082400 Sobic008G082400 Sobic001G265900--Sobic008G082400 Sobic009G162800 Sobic009G162800 Sobic010G196400--Sobic009G162800 Sobic010G196400--Sobic001G066900 Sobic010G196400--Sobic001G265900 Sobic006G166800 Sobic006G166800 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic003G153400 Sobic003G153400 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic010G196400--Sobic001G250200 Sobic005G147800--Sobic007G142300 Sobic005G147800--Sobic001G265900 Sobic005G147800--Sobic002G397400 Sobic005G147800--Sobic010G107200 Sobic010G124200 Sobic010G124200 Sobic005G147800--Sobic010G124200 Sobic005G209900 Sobic005G209900 Sobic005G147800--Sobic005G209900 Sobic010G096200 Sobic010G096200 Sobic005G147800--Sobic010G096200 Sobic005G212400 Sobic005G212400 Sobic005G147800--Sobic005G212400 Sobic001G127700 Sobic001G127700 Sobic005G147800--Sobic001G127700 Sobic001G066900--Sobic010G196400 Sobic001G066900--Sobic001G265900 Sobic005G146300 Sobic005G146300 Sobic001G066900--Sobic005G146300 Sobic008G112200 Sobic008G112200 Sobic001G066900--Sobic008G112200 Sobic009G031400 Sobic009G031400 Sobic001G066900--Sobic009G031400 Sobic001G066900--Sobic001G250200 Sobic010G199700 Sobic010G199700 Sobic001G066900--Sobic010G199700 Sobic002G003200 Sobic002G003200 Sobic001G066900--Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic001G066900--Sobic003G352800 Sobic007G107950--Sobic001G250200 Sobic009G211800 Sobic009G211800 Sobic007G107950--Sobic009G211800 Sobic007G107950--Sobic010G196400 Sobic007G107950--Sobic001G265900 Sobic003G134201 Sobic003G134201 Sobic007G107950--Sobic003G134201 Sobic007G107950--Sobic005G147800 Sobic007G107950--Sobic001G307300 Sobic007G107950--Sobic001G066900 Sobic007G107950--Sobic007G142300 Sobic010G107200--Sobic005G209900 Sobic005G196500 Sobic005G196500 Sobic010G107200--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic010G107200--Sobic006G233600 Sobic009G154100 Sobic009G154100 Sobic010G107200--Sobic009G154100 Sobic006G032800 Sobic006G032800 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic010G107200--Sobic005G147800 Sobic003G085200--Sobic010G196400 Sobic003G085200--Sobic009G162800 Sobic003G085200--Sobic001G307300 Sobic003G085200--Sobic001G250200 Sobic003G108000 Sobic003G108000 Sobic003G085200--Sobic003G108000 Sobic009G119400 Sobic009G119400 Sobic003G085200--Sobic009G119400 Sobic003G085200--Sobic006G166800 Sobic003G085200--Sobic003G352800 Sobic003G085200--Sobic001G265900 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic007G142300--Sobic001G265900 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic007G142300--Sobic010G124200 Sobic007G142300--Sobic006G032800 Sobic003G045700 Sobic003G045700 Sobic001G221200--Sobic003G045700 Sobic010G231600 Sobic010G231600 Sobic001G221200--Sobic010G231600 Sobic001G023500 Sobic001G023500 Sobic001G221200--Sobic001G023500 Sobic009G153400 Sobic009G153400 Sobic001G221200--Sobic009G153400 Sobic003G326700 Sobic003G326700 Sobic001G221200--Sobic003G326700 Sobic001G221200--Sobic001G250200 Sobic001G221200--Sobic009G031400 Sobic004G028900 Sobic004G028900 Sobic001G221200--Sobic004G028900 Sobic002G382500 Sobic002G382500 Sobic001G221200--Sobic002G382500
Octagon: transcription factors


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