Gene annotation
Transcriptome id Sobic.003G085200.1
Synonym Sb03g007160
Functional annotation expressed protein
UniProt A0A1W0VWB9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g04080.1 : expressed protein
MaizeGDB (Corn) Zm00025a023613
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G196400 expressed protein -
2 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
4 Sobic.001G250200 glycerol-3-phosphate acyltransferase, putative, expressed -
5 Sobic.003G108000 expressed protein -
6 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -
7 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
11 Sobic.008G163000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR57 - Auxin-responsive SAUR gene family member, expressed -
12 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
13 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
15 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
16 Sobic.007G107950 - -
17 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
18 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
19 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
20 Sobic.008G055000 - -


Gene co-expression network
sample Sobic003G085200 Sobic003G085200 Sobic010G196400 Sobic010G196400 Sobic003G085200--Sobic010G196400 Sobic009G162800 Sobic009G162800 Sobic003G085200--Sobic009G162800 Sobic001G307300 Sobic001G307300 Sobic003G085200--Sobic001G307300 Sobic001G250200 Sobic001G250200 Sobic003G085200--Sobic001G250200 Sobic003G108000 Sobic003G108000 Sobic003G085200--Sobic003G108000 Sobic009G119400 Sobic009G119400 Sobic003G085200--Sobic009G119400 Sobic006G166800 Sobic006G166800 Sobic003G085200--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic003G085200--Sobic003G352800 Sobic001G265900 Sobic001G265900 Sobic003G085200--Sobic001G265900 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic003G153400 Sobic003G153400 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic010G196400--Sobic001G250200 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic007G027200 Sobic007G027200 Sobic009G162800--Sobic007G027200 Sobic001G510200 Sobic001G510200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G241600 Sobic009G241600 Sobic009G162800--Sobic009G241600 Sobic001G307300--Sobic009G119400 Sobic001G336800 Sobic001G336800 Sobic001G307300--Sobic001G336800 Sobic001G307300--Sobic010G196400 Sobic001G307300--Sobic001G275600 Sobic009G215600 Sobic009G215600 Sobic001G307300--Sobic009G215600 Sobic002G397400 Sobic002G397400 Sobic001G307300--Sobic002G397400 Sobic002G351000 Sobic002G351000 Sobic001G307300--Sobic002G351000 Sobic001G307300--Sobic009G151000 Sobic001G307300--Sobic001G265900 Sobic001G250200--Sobic001G265900 Sobic001G250200--Sobic010G196400 Sobic005G147800 Sobic005G147800 Sobic001G250200--Sobic005G147800 Sobic001G250200--Sobic001G066900 Sobic007G107950 Sobic007G107950 Sobic001G250200--Sobic007G107950 Sobic010G107200 Sobic010G107200 Sobic001G250200--Sobic010G107200 Sobic001G250200--Sobic003G085200 Sobic007G142300 Sobic007G142300 Sobic001G250200--Sobic007G142300 Sobic001G221200 Sobic001G221200 Sobic001G250200--Sobic001G221200 Sobic003G108000--Sobic009G151000 Sobic003G108000--Sobic010G196400 Sobic003G108000--Sobic009G119400 Sobic003G108000--Sobic001G275600 Sobic008G163000 Sobic008G163000 Sobic003G108000--Sobic008G163000 Sobic004G168700 Sobic004G168700 Sobic003G108000--Sobic004G168700 Sobic006G001000 Sobic006G001000 Sobic003G108000--Sobic006G001000 Sobic003G108000--Sobic001G307300 Sobic003G108000--Sobic003G085200 Sobic009G119400--Sobic002G351000 Sobic002G141100 Sobic002G141100 Sobic009G119400--Sobic002G141100 Sobic009G119400--Sobic001G307300 Sobic009G119400--Sobic009G215600 Sobic007G009600 Sobic007G009600 Sobic009G119400--Sobic007G009600 Sobic004G060700 Sobic004G060700 Sobic009G119400--Sobic004G060700 Sobic007G170800 Sobic007G170800 Sobic009G119400--Sobic007G170800 Sobic008G163200 Sobic008G163200 Sobic009G119400--Sobic008G163200 Sobic005G110436 Sobic005G110436 Sobic009G119400--Sobic005G110436 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic001G265900--Sobic005G147800 Sobic001G265900--Sobic010G196400 Sobic001G265900--Sobic001G250200 Sobic001G265900--Sobic001G066900 Sobic001G265900--Sobic007G142300 Sobic001G265900--Sobic002G397400 Sobic001G265900--Sobic010G107200 Sobic001G265900--Sobic001G307300 Sobic008G082400 Sobic008G082400 Sobic001G265900--Sobic008G082400
Octagon: transcription factors


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