Gene annotation
Transcriptome id Sobic.008G163000.1
Synonym Sb08g020930, SbSAUR61, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR57 - Auxin-responsive SAUR gene family member, expressed
UniProt C5YRJ0
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT3G12955 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os12g41600.1 : OsSAUR57 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a025332
Brachypodium KQJ85869
Barley HORVU5Hr1G011940.18
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G275600 peptide transporter PTR2, putative, expressed -
2 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
3 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
5 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.009G151000 Subtilase family protein("PubMedID : 26759170,PubMedID : 24597475")@OsSub47 - Putative Subtilisin homologue, expressed -
7 Sobic.010G196400 expressed protein -
8 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G108000 expressed protein -
10 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.001G307300 short chain dehydrogenase/reductase protein, putative, expressed -
12 Sobic.001G405000 MRH1, putative, expressed -
13 Sobic.002G351000 fasciclin domain containing protein, expressed -
14 Sobic.005G200600 dirigent, putative, expressed -
15 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
17 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.009G215600 expressed protein -
19 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic008G163000 Sobic008G163000 Sobic001G275600 Sobic001G275600 Sobic008G163000--Sobic001G275600 Sobic006G001000 Sobic006G001000 Sobic008G163000--Sobic006G001000 Sobic009G119400 Sobic009G119400 Sobic008G163000--Sobic009G119400 Sobic004G344200 Sobic004G344200 Sobic008G163000--Sobic004G344200 Sobic008G164900 Sobic008G164900 Sobic008G163000--Sobic008G164900 Sobic009G151000 Sobic009G151000 Sobic008G163000--Sobic009G151000 Sobic010G196400 Sobic010G196400 Sobic008G163000--Sobic010G196400 Sobic002G003200 Sobic002G003200 Sobic008G163000--Sobic002G003200 Sobic003G108000 Sobic003G108000 Sobic008G163000--Sobic003G108000 Sobic001G275600--Sobic009G151000 Sobic001G275600--Sobic008G163000 Sobic009G215600 Sobic009G215600 Sobic001G275600--Sobic009G215600 Sobic001G307300 Sobic001G307300 Sobic001G275600--Sobic001G307300 Sobic001G275600--Sobic006G001000 Sobic001G275600--Sobic009G119400 Sobic008G173200 Sobic008G173200 Sobic001G275600--Sobic008G173200 Sobic001G275600--Sobic010G196400 Sobic002G141100 Sobic002G141100 Sobic001G275600--Sobic002G141100 Sobic006G001000--Sobic001G275600 Sobic006G001000--Sobic008G163000 Sobic006G001000--Sobic009G151000 Sobic006G001000--Sobic002G003200 Sobic003G352800 Sobic003G352800 Sobic006G001000--Sobic003G352800 Sobic006G001000--Sobic003G108000 Sobic006G001000--Sobic009G215600 Sobic006G001000--Sobic004G344200 Sobic003G427900 Sobic003G427900 Sobic006G001000--Sobic003G427900 Sobic002G351000 Sobic002G351000 Sobic009G119400--Sobic002G351000 Sobic009G119400--Sobic002G141100 Sobic009G119400--Sobic001G307300 Sobic009G119400--Sobic009G215600 Sobic007G009600 Sobic007G009600 Sobic009G119400--Sobic007G009600 Sobic004G060700 Sobic004G060700 Sobic009G119400--Sobic004G060700 Sobic007G170800 Sobic007G170800 Sobic009G119400--Sobic007G170800 Sobic008G163200 Sobic008G163200 Sobic009G119400--Sobic008G163200 Sobic005G110436 Sobic005G110436 Sobic009G119400--Sobic005G110436 Sobic004G344200--Sobic002G003200 Sobic009G153800 Sobic009G153800 Sobic004G344200--Sobic009G153800 Sobic004G344200--Sobic003G352800 Sobic008G059800 Sobic008G059800 Sobic004G344200--Sobic008G059800 Sobic004G344200--Sobic008G163000 Sobic008G112200 Sobic008G112200 Sobic004G344200--Sobic008G112200 Sobic002G164600 Sobic002G164600 Sobic004G344200--Sobic002G164600 Sobic004G344200--Sobic006G001000 Sobic009G241600 Sobic009G241600 Sobic004G344200--Sobic009G241600 Sobic008G164900--Sobic008G163000 Sobic002G072200 Sobic002G072200 Sobic008G164900--Sobic002G072200 Sobic010G086800 Sobic010G086800 Sobic008G164900--Sobic010G086800 Sobic003G062000 Sobic003G062000 Sobic008G164900--Sobic003G062000 Sobic001G334900 Sobic001G334900 Sobic008G164900--Sobic001G334900 Sobic004G168700 Sobic004G168700 Sobic008G164900--Sobic004G168700 Sobic001G208600 Sobic001G208600 Sobic008G164900--Sobic001G208600 Sobic007G090424 Sobic007G090424 Sobic008G164900--Sobic007G090424 Sobic001G345900 Sobic001G345900 Sobic008G164900--Sobic001G345900 Sobic009G151000--Sobic001G275600 Sobic009G151000--Sobic008G173200 Sobic003G153400 Sobic003G153400 Sobic009G151000--Sobic003G153400 Sobic009G151000--Sobic010G196400 Sobic009G151000--Sobic003G108000 Sobic009G151000--Sobic001G307300 Sobic009G151000--Sobic006G001000 Sobic001G336800 Sobic001G336800 Sobic009G151000--Sobic001G336800 Sobic009G070600 Sobic009G070600 Sobic009G151000--Sobic009G070600 Sobic009G162800 Sobic009G162800 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic006G166800 Sobic006G166800 Sobic010G196400--Sobic006G166800 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic010G196400--Sobic001G275600 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic002G003200--Sobic003G352800 Sobic002G003200--Sobic009G153800 Sobic002G003200--Sobic004G344200 Sobic001G405000 Sobic001G405000 Sobic002G003200--Sobic001G405000 Sobic002G003200--Sobic008G059800 Sobic002G003200--Sobic006G001000 Sobic009G162500 Sobic009G162500 Sobic002G003200--Sobic009G162500 Sobic002G003200--Sobic001G066900 Sobic002G003200--Sobic008G163000 Sobic003G108000--Sobic009G151000 Sobic003G108000--Sobic010G196400 Sobic003G108000--Sobic009G119400 Sobic003G108000--Sobic001G275600 Sobic003G108000--Sobic008G163000 Sobic003G108000--Sobic004G168700 Sobic003G108000--Sobic006G001000 Sobic003G108000--Sobic001G307300 Sobic003G085200 Sobic003G085200 Sobic003G108000--Sobic003G085200
Octagon: transcription factors


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