Gene annotation
Transcriptome id Sobic.009G162800.1
Synonym LAC17, ATLAC17, Sb09g022510
Functional annotation laccase precursor protein, putative, expressed
UniProt C5YZ93
Pfam PF07732 PF07731 PF00394
Panther DB PTHR11709 PTHR11709:SF112
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0005507; copper ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G60020 : laccase 17
RAP-DB (Rice) LOC_Os05g38420.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a039673 , Zm00025a054092 , Zm00025a026896 , Zm00025a026897 , Zm00025a044821 , Zm00025a026887 , Zm00025a001815
Brachypodium KQK05918 , KQK05916 , KQK10527 , KQK10526 , KQK15781
Barley HORVU1Hr1G072530.2 , HORVU1Hr1G072530.3 , HORVU1Hr1G072530.1 , HORVU1Hr1G072530.6 , HORVU1Hr1G072530.7 , HORVU1Hr1G072530.4 , HORVU1Hr1G072530.5 , HORVU1Hr1G072530.8 , HORVU1Hr1G072530.9 , HORVU1Hr1G008360.8 , HORVU1Hr1G008360.9 , HORVU1Hr1G008360.2 , HORVU1Hr1G008360.3 , HORVU1Hr1G008360.1 , HORVU1Hr1G008360.6 , HORVU1Hr1G008360.7 , HORVU1Hr1G008360.4 , HORVU1Hr1G008360.5 , HORVU6Hr1G013870.3 , HORVU6Hr1G013870.2 , HORVU3Hr1G086200.9 , HORVU3Hr1G086200.8 , HORVU3Hr1G086200.5 , HORVU3Hr1G086200.4 , HORVU3Hr1G086200.7 , HORVU3Hr1G086200.6 , HORVU3Hr1G086200.1 , HORVU3Hr1G086200.3 , HORVU3Hr1G086200.2 , HORVU7Hr1G039310.1 , HORVU4Hr1G059930.5 , HORVU4Hr1G059930.6 , HORVU4Hr1G059930.7 , HORVU4Hr1G059930.1 , HORVU4Hr1G059930.2 , HORVU4Hr1G059930.3 , HORVU4Hr1G059930.8 , HORVU4Hr1G059930.9 , HORVU7Hr1G039250.9 , HORVU7Hr1G039250.8 , HORVU1Hr1G072470.3 , HORVU1Hr1G072470.2 , HORVU1Hr1G072470.1 , HORVU1Hr1G072470.7 , HORVU1Hr1G072470.6 , HORVU1Hr1G072470.5 , HORVU1Hr1G072470.4 , HORVU1Hr1G072470.9 , HORVU1Hr1G072470.8 , HORVU4Hr1G059930.12 , HORVU4Hr1G059930.13 , HORVU4Hr1G059930.10 , HORVU4Hr1G059930.11 , HORVU7Hr1G039250.1 , HORVU7Hr1G039250.2 , HORVU7Hr1G039250.3 , HORVU7Hr1G039250.4 , HORVU7Hr1G039250.6 , HORVU7Hr1G039250.7 , HORVU3Hr1G086100.8 , HORVU3Hr1G086100.9 , HORVU3Hr1G086100.2 , HORVU3Hr1G086100.3 , HORVU3Hr1G086100.1 , HORVU3Hr1G086100.6 , HORVU3Hr1G086100.7 , HORVU3Hr1G086100.4 , HORVU3Hr1G086100.5 , HORVU2Hr1G041290.2 , HORVU2Hr1G041290.3 , HORVU2Hr1G041290.1 , HORVU2Hr1G041290.4 , HORVU2Hr1G041290.5 , HORVU7Hr1G096350.2 , HORVU7Hr1G096350.3 , HORVU7Hr1G096350.1 , HORVU7Hr1G096350.6 , HORVU7Hr1G096350.4 , HORVU7Hr1G096350.5 , HORVU1Hr1G072470.10
Wheat TraesCS1D02G044600 , TraesCS1B02G293100 , TraesCS2A02G206500 , TraesCS4B02G208000 , TraesCS4B02G208000 , TraesCS2D02G209400 , TraesCS5D02G514600 , TraesCS5D02G514600 , TraesCS3B02G393500 , TraesCS4A02G096400 , TraesCS3D02G354200 , TraesCS3B02G392700 , TraesCS3D02G354400 , TraesCS2D02G209800 , TraesCS3A02G360400 , TraesCS3D02G354900 , TraesCS2B02G233500 , TraesCS7A02G191900 , TraesCS2B02G233700 , TraesCS1B02G056900 , TraesCS1D02G282600 , TraesCS7B02G097100 , TraesCS3A02G361100 , TraesCS7D02G192900 , TraesCS1D02G283000 , TraesCS3A02G360600 , TraesCS4D02G208900 , TraesCS1A02G283900 , TraesCS7D02G193100 , TraesCS1D02G044300 , TraesCS7A02G192100 , TraesCS5B02G514100 , TraesCS3B02G393000 , TraesCS1A02G283400 , TraesCS1A02G043900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.010G196400 expressed protein -
4 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
5 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
6 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.003G276200 - -
9 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
10 Sobic.003G085200 expressed protein -
11 Sobic.007G138800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.008G173200 ZOS12-10 - C2H2 zinc finger protein, expressed -
13 Sobic.001G266200 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.007G095000 cytochrome P450, putative, expressed -
15 Sobic.007G043800 expressed protein -
16 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.006G125600 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
18 Sobic.003G146200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@two-component response regulator, putative, expressed -
19 Sobic.003G430000 eukaryotic aspartyl protease domain containing protein, expressed -
20 Sobic.010G108301 - K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic009G162800 Sobic009G162800 Sobic006G166800 Sobic006G166800 Sobic009G162800--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic009G162800--Sobic003G352800 Sobic010G196400 Sobic010G196400 Sobic009G162800--Sobic010G196400 Sobic007G027200 Sobic007G027200 Sobic009G162800--Sobic007G027200 Sobic001G510200 Sobic001G510200 Sobic009G162800--Sobic001G510200 Sobic003G153400 Sobic003G153400 Sobic009G162800--Sobic003G153400 Sobic002G394700 Sobic002G394700 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G241600 Sobic009G241600 Sobic009G162800--Sobic009G241600 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic003G352800--Sobic006G166800 Sobic003G352800--Sobic009G162800 Sobic003G352800--Sobic007G027200 Sobic002G003200 Sobic002G003200 Sobic003G352800--Sobic002G003200 Sobic003G352800--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic003G352800--Sobic008G059800 Sobic009G153800 Sobic009G153800 Sobic003G352800--Sobic009G153800 Sobic003G427900 Sobic003G427900 Sobic003G352800--Sobic003G427900 Sobic003G352800--Sobic010G196400 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic010G196400--Sobic006G166800 Sobic001G307300 Sobic001G307300 Sobic010G196400--Sobic001G307300 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200 Sobic003G153400--Sobic006G166800 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic003G153400--Sobic009G151000 Sobic003G153400--Sobic010G196400 Sobic003G153400--Sobic009G162800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic002G394700--Sobic010G108200 Sobic002G394700--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic002G394700--Sobic003G071300 Sobic007G095000 Sobic007G095000 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic010G108600 Sobic010G108600 Sobic002G394700--Sobic010G108600 Sobic003G276200--Sobic009G162800 Sobic003G276200--Sobic006G166800 Sobic003G276200--Sobic003G153400 Sobic009G082550 Sobic009G082550 Sobic003G276200--Sobic009G082550 Sobic003G276200--Sobic010G196400 Sobic003G276200--Sobic001G510200 Sobic003G276200--Sobic009G151000 Sobic003G276200--Sobic007G027200 Sobic003G276200--Sobic003G352800 Sobic003G236701 Sobic003G236701 Sobic009G241600--Sobic003G236701 Sobic009G241600--Sobic007G027200 Sobic006G066500 Sobic006G066500 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic002G164600 Sobic002G164600 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic008G112200 Sobic008G112200 Sobic009G241600--Sobic008G112200 Sobic003G112200 Sobic003G112200 Sobic009G241600--Sobic003G112200 Sobic009G241600--Sobic006G166800
Octagon: transcription factors


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