Gene annotation
Transcriptome id Sobic.001G266200.1
Synonym Sb01g026180, ATPRP4, PRP4
Functional annotation POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed
UniProt C5WP19
Pfam PF01190
Panther DB PTHR33935 PTHR33935:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38770 : proline-rich protein 4
RAP-DB (Rice) LOC_Os10g05990.2 : POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed
MaizeGDB (Corn) Zm00025a003792
Brachypodium KQJ81980
Barley HORVU2Hr1G011420.4 , HORVU2Hr1G011420.5 , HORVU2Hr1G011420.1 , HORVU2Hr1G011420.2 , HORVU2Hr1G011420.3
Wheat TraesCS2B02G075600 , TraesCS2A02G062800 , TraesCS2A02G061800 , TraesCSU02G242600 , TraesCSU02G264800 , TraesCS2B02G075700 , TraesCS2B02G075400 , TraesCSU02G155600 , TraesCSU02G242700 , TraesCSU02G243700 , TraesCS2D02G061400 , TraesCS2D02G061400 , TraesCS2A02G062900 , TraesCSU02G146800 , TraesCSU02G208500 , TraesCSU02G207300 , TraesCSU02G024700 , TraesCS2A02G062200 , TraesCSU02G243700 , TraesCSU02G146900 , TraesCS2B02G075500 , TraesCSU02G201000
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G266200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
2 Sobic.010G231600 cytochrome P450, putative, expressed -
3 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
5 Sobic.001G538000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
6 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
7 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.002G039400 YABBY domain containing protein, putative, expressed -
9 Sobic.010G124600 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
10 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
11 Sobic.005G146300 Ser/Thr protein phosphatase family protein, putative, expressed K14379: tartrate-resistant acid phosphatase type 5
12 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.001G050300 LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
14 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
16 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.010G196400 expressed protein -
18 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
19 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
20 Sobic.004G218100 Protein octadecanal decarbonylase CER1 (Os)(PubMedID : 27208977)@WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase


Gene co-expression network
sample Sobic001G266200 Sobic001G266200 Sobic001G510200 Sobic001G510200 Sobic001G266200--Sobic001G510200 Sobic010G231600 Sobic010G231600 Sobic001G266200--Sobic010G231600 Sobic006G166800 Sobic006G166800 Sobic001G266200--Sobic006G166800 Sobic007G027200 Sobic007G027200 Sobic001G266200--Sobic007G027200 Sobic001G538000 Sobic001G538000 Sobic001G266200--Sobic001G538000 Sobic009G162800 Sobic009G162800 Sobic001G266200--Sobic009G162800 Sobic010G200900 Sobic010G200900 Sobic001G266200--Sobic010G200900 Sobic002G039400 Sobic002G039400 Sobic001G266200--Sobic002G039400 Sobic010G124600 Sobic010G124600 Sobic001G266200--Sobic010G124600 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic002G394700 Sobic002G394700 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200 Sobic003G045700 Sobic003G045700 Sobic010G231600--Sobic003G045700 Sobic001G207600 Sobic001G207600 Sobic010G231600--Sobic001G207600 Sobic006G014400 Sobic006G014400 Sobic010G231600--Sobic006G014400 Sobic001G023500 Sobic001G023500 Sobic010G231600--Sobic001G023500 Sobic004G283800 Sobic004G283800 Sobic010G231600--Sobic004G283800 Sobic001G441700 Sobic001G441700 Sobic010G231600--Sobic001G441700 Sobic009G031400 Sobic009G031400 Sobic010G231600--Sobic009G031400 Sobic009G173200 Sobic009G173200 Sobic010G231600--Sobic009G173200 Sobic010G231600--Sobic001G266200 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic003G352800 Sobic003G352800 Sobic006G166800--Sobic003G352800 Sobic003G153400 Sobic003G153400 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic010G196400 Sobic010G196400 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic009G241600 Sobic009G241600 Sobic006G166800--Sobic009G241600 Sobic007G027200--Sobic006G166800 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic010G199700 Sobic010G199700 Sobic007G027200--Sobic010G199700 Sobic007G027200--Sobic003G352800 Sobic007G027200--Sobic009G162800 Sobic007G027200--Sobic007G043800 Sobic001G538000--Sobic010G124600 Sobic001G538000--Sobic008G008200 Sobic001G538000--Sobic004G167000 Sobic008G087300 Sobic008G087300 Sobic001G538000--Sobic008G087300 Sobic007G068700 Sobic007G068700 Sobic001G538000--Sobic007G068700 Sobic009G239800 Sobic009G239800 Sobic001G538000--Sobic009G239800 Sobic010G180000 Sobic010G180000 Sobic001G538000--Sobic010G180000 Sobic010G005900 Sobic010G005900 Sobic001G538000--Sobic010G005900 Sobic001G303750 Sobic001G303750 Sobic001G538000--Sobic001G303750 Sobic009G162800--Sobic006G166800 Sobic009G162800--Sobic003G352800 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G162800--Sobic009G241600 Sobic003G062900 Sobic003G062900 Sobic010G200900--Sobic003G062900 Sobic003G070200 Sobic003G070200 Sobic010G200900--Sobic003G070200 Sobic001G153800 Sobic001G153800 Sobic010G200900--Sobic001G153800 Sobic001G359100 Sobic001G359100 Sobic010G200900--Sobic001G359100 Sobic006G059400 Sobic006G059400 Sobic010G200900--Sobic006G059400 Sobic002G334400 Sobic002G334400 Sobic010G200900--Sobic002G334400 Sobic002G305400 Sobic002G305400 Sobic010G200900--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic010G200900--Sobic009G087900 Sobic002G260100 Sobic002G260100 Sobic010G200900--Sobic002G260100 Sobic005G088500 Sobic005G088500 Sobic002G039400--Sobic005G088500 Sobic001G266600 Sobic001G266600 Sobic002G039400--Sobic001G266600 Sobic002G039400--Sobic001G510200 Sobic004G341300 Sobic004G341300 Sobic002G039400--Sobic004G341300 Sobic007G162200 Sobic007G162200 Sobic002G039400--Sobic007G162200 Sobic010G195800 Sobic010G195800 Sobic002G039400--Sobic010G195800 Sobic002G039400--Sobic008G087300 Sobic002G039400--Sobic004G167000 Sobic006G005700 Sobic006G005700 Sobic002G039400--Sobic006G005700 Sobic010G124600--Sobic004G167000 Sobic010G124600--Sobic008G087300 Sobic001G266900 Sobic001G266900 Sobic010G124600--Sobic001G266900 Sobic010G124600--Sobic008G008200 Sobic003G040400 Sobic003G040400 Sobic010G124600--Sobic003G040400 Sobic010G124600--Sobic010G180000 Sobic010G124600--Sobic009G239800 Sobic008G138300 Sobic008G138300 Sobic010G124600--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic010G124600--Sobic010G159500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.