Gene annotation
Transcriptome id Sobic.004G218100.4,Sobic.004G218100.5
Synonym Sb04g026320, CER1
Functional annotation Protein octadecanal decarbonylase CER1 (Os) (PubMedID : 27208977)
WAX2, putative, expressed
UniProt C5XXR6
Pfam PF12076 PF04116 PF04116 PF12076
Panther DB PTHR11863:SF56 PTHR11863 PTHR11863 PTHR11863:SF56
NCBI CDD -
KEGG Orthology K15404; K15404, aldehyde decarbonylase
Gene Ontology GO:0005506; iron ion binding GO:0006633fatty acid biosynthetic process GO:0016491oxidoreductase activity GO:0016491oxidoreductase activity GO:0006633fatty acid biosynthetic process GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G02205 : Fatty acid hydroxylase superfamily
RAP-DB (Rice) LOC_Os02g40784.1 : WAX2, putative, expressed
MaizeGDB (Corn) Zm00025a021122 , Zm00025a032821
Brachypodium KQK00380 , KQK00381 , KQJ97038 , KQJ97037
Barley HORVU6Hr1G058000.11 , HORVU6Hr1G058000.10 , HORVU6Hr1G058000.12 , HORVU6Hr1G058000.9 , HORVU2Hr1G088880.1 , HORVU2Hr1G088880.2 , HORVU2Hr1G088880.3 , HORVU2Hr1G088880.5 , HORVU2Hr1G088880.6 , HORVU2Hr1G088880.9 , HORVU6Hr1G058000.5 , HORVU6Hr1G058000.4 , HORVU6Hr1G058000.7 , HORVU6Hr1G058000.6 , HORVU6Hr1G058000.1 , HORVU6Hr1G058000.3 , HORVU6Hr1G058000.2 , HORVU1Hr1G039830.2 , HORVU6Hr1G058000.8 , HORVU1Hr1G039830.1 , HORVU7Hr1G023150.1 , HORVU7Hr1G023150.2 , HORVU7Hr1G023150.3 , HORVU7Hr1G023150.4 , HORVU7Hr1G023150.5 , HORVU7Hr1G023150.6 , HORVU7Hr1G023150.7 , HORVU4Hr1G001510.1 , HORVU2Hr1G088860.8 , HORVU2Hr1G088860.9 , HORVU2Hr1G088860.2 , HORVU2Hr1G088860.3 , HORVU2Hr1G088860.1 , HORVU2Hr1G088860.6 , HORVU2Hr1G088860.7 , HORVU2Hr1G088860.4 , HORVU2Hr1G088860.5
Wheat TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6D02G208500 , TraesCS6A02G226500 , TraesCS6A02G226500 , TraesCS2A02G385100 , TraesCS2A02G385100 , TraesCS2A02G385100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS6B02G255100 , TraesCS2A02G385200 , TraesCS2D02G381800 , TraesCS7D02G102700 , TraesCS1D02G147900 , TraesCS1D02G147900 , TraesCS2D02G381900 , TraesCS2B02G402100 , TraesCS1A02G150800 , TraesCS1B02G168500 , TraesCS1A02G150900
Populus -


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cDNA sequences
Sobic.004G218100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
2 Sobic.009G180300 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
3 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
4 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
5 Sobic.001G266600 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.003G098100 aquaporin protein, putative, expressed K09874: aquaporin NIP
7 Sobic.007G162200 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.009G048600 - -
9 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -
10 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
11 Sobic.006G005700 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
12 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
13 Sobic.005G006000 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
14 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.004G017500 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.009G153400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
17 Sobic.009G146000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@galactosyltransferase, putative, expressed -
18 Sobic.004G341300 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.008G156100 ankyrin repeat domain-containing protein 44, putative, expressed -
20 Sobic.002G028201 - K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic004G218100 Sobic004G218100 Sobic009G187700 Sobic009G187700 Sobic004G218100--Sobic009G187700 Sobic009G180300 Sobic009G180300 Sobic004G218100--Sobic009G180300 Sobic007G068700 Sobic007G068700 Sobic004G218100--Sobic007G068700 Sobic010G195800 Sobic010G195800 Sobic004G218100--Sobic010G195800 Sobic001G266600 Sobic001G266600 Sobic004G218100--Sobic001G266600 Sobic003G098100 Sobic003G098100 Sobic004G218100--Sobic003G098100 Sobic007G162200 Sobic007G162200 Sobic004G218100--Sobic007G162200 Sobic009G048600 Sobic009G048600 Sobic004G218100--Sobic009G048600 Sobic002G007500 Sobic002G007500 Sobic004G218100--Sobic002G007500 Sobic009G187700--Sobic009G180300 Sobic009G187700--Sobic007G068700 Sobic003G062900 Sobic003G062900 Sobic009G187700--Sobic003G062900 Sobic001G153800 Sobic001G153800 Sobic009G187700--Sobic001G153800 Sobic006G059400 Sobic006G059400 Sobic009G187700--Sobic006G059400 Sobic003G070200 Sobic003G070200 Sobic009G187700--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic009G187700--Sobic001G359100 Sobic002G334400 Sobic002G334400 Sobic009G187700--Sobic002G334400 Sobic002G260100 Sobic002G260100 Sobic009G187700--Sobic002G260100 Sobic009G180300--Sobic009G187700 Sobic006G067300 Sobic006G067300 Sobic009G180300--Sobic006G067300 Sobic009G180300--Sobic002G007500 Sobic004G089400 Sobic004G089400 Sobic009G180300--Sobic004G089400 Sobic005G006701 Sobic005G006701 Sobic009G180300--Sobic005G006701 Sobic009G180300--Sobic003G062900 Sobic008G057500 Sobic008G057500 Sobic009G180300--Sobic008G057500 Sobic009G180300--Sobic002G260100 Sobic004G149200 Sobic004G149200 Sobic009G180300--Sobic004G149200 Sobic008G008200 Sobic008G008200 Sobic007G068700--Sobic008G008200 Sobic010G180000 Sobic010G180000 Sobic007G068700--Sobic010G180000 Sobic009G239800 Sobic009G239800 Sobic007G068700--Sobic009G239800 Sobic002G305400 Sobic002G305400 Sobic007G068700--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic007G068700--Sobic009G087900 Sobic004G167000 Sobic004G167000 Sobic007G068700--Sobic004G167000 Sobic003G206100 Sobic003G206100 Sobic007G068700--Sobic003G206100 Sobic008G087300 Sobic008G087300 Sobic007G068700--Sobic008G087300 Sobic007G068700--Sobic001G153800 Sobic010G195800--Sobic007G162200 Sobic010G195800--Sobic001G266600 Sobic010G195800--Sobic009G048600 Sobic010G195800--Sobic008G008200 Sobic010G195800--Sobic008G087300 Sobic010G195800--Sobic007G068700 Sobic010G195800--Sobic004G167000 Sobic010G195800--Sobic009G239800 Sobic005G110538 Sobic005G110538 Sobic010G195800--Sobic005G110538 Sobic001G266600--Sobic009G048600 Sobic001G266600--Sobic007G162200 Sobic005G006000 Sobic005G006000 Sobic001G266600--Sobic005G006000 Sobic001G266600--Sobic010G195800 Sobic006G005700 Sobic006G005700 Sobic001G266600--Sobic006G005700 Sobic008G156100 Sobic008G156100 Sobic001G266600--Sobic008G156100 Sobic002G028201 Sobic002G028201 Sobic001G266600--Sobic002G028201 Sobic006G281132 Sobic006G281132 Sobic001G266600--Sobic006G281132 Sobic009G146000 Sobic009G146000 Sobic001G266600--Sobic009G146000 Sobic003G098100--Sobic009G146000 Sobic003G098100--Sobic005G006000 Sobic003G098100--Sobic008G156100 Sobic003G098100--Sobic002G028201 Sobic003G098100--Sobic006G281132 Sobic003G098100--Sobic009G048600 Sobic003G367100 Sobic003G367100 Sobic003G098100--Sobic003G367100 Sobic003G098100--Sobic001G266600 Sobic003G098100--Sobic006G005700 Sobic007G162200--Sobic001G266600 Sobic007G162200--Sobic010G195800 Sobic007G162200--Sobic009G048600 Sobic007G162200--Sobic008G087300 Sobic007G162200--Sobic005G006000 Sobic007G162200--Sobic006G005700 Sobic007G162200--Sobic008G008200 Sobic007G162200--Sobic004G167000 Sobic007G162200--Sobic009G239800 Sobic009G048600--Sobic001G266600 Sobic009G048600--Sobic005G006000 Sobic009G048600--Sobic008G156100 Sobic009G048600--Sobic002G028201 Sobic009G048600--Sobic006G281132 Sobic009G048600--Sobic006G005700 Sobic009G048600--Sobic007G162200 Sobic009G048600--Sobic009G146000 Sobic009G048600--Sobic010G195800 Sobic008G163900 Sobic008G163900 Sobic002G007500--Sobic008G163900 Sobic002G007500--Sobic009G180300 Sobic004G017500 Sobic004G017500 Sobic002G007500--Sobic004G017500 Sobic002G007500--Sobic006G067300 Sobic002G121100 Sobic002G121100 Sobic002G007500--Sobic002G121100 Sobic002G007500--Sobic008G057500 Sobic010G043300 Sobic010G043300 Sobic002G007500--Sobic010G043300 Sobic002G007500--Sobic004G089400 Sobic002G007500--Sobic009G187700
Octagon: transcription factors


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