Gene annotation
Transcriptome id Sobic.001G050300.1
Synonym Sb01g004610
Functional annotation LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
UniProt C5WX03
Pfam PF14368
Panther DB PTHR33044 PTHR33044:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44290 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g58940.1 : LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a008626
Brachypodium KQK12618 , KQK20448 , KQK12617
Barley HORVU5Hr1G109100.6 , HORVU5Hr1G109100.4 , HORVU5Hr1G109100.5 , HORVU5Hr1G109100.2 , HORVU5Hr1G109100.3 , HORVU5Hr1G109100.1 , HORVU5Hr1G109040.5 , HORVU5Hr1G109040.4 , HORVU5Hr1G109040.3 , HORVU5Hr1G109040.2 , HORVU5Hr1G109040.1
Wheat TraesCS5A02G452700 , TraesCS5A02G452700 , TraesCS5D02G463000 , TraesCS5B02G461500 , TraesCS5D02G463100 , TraesCS6B02G287900 , TraesCS5A02G452600 , TraesCS6D02G241400
Populus -


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cDNA sequences
Sobic.001G050300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G200900 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
3 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.002G431700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PCNA - Putative DNA replicative polymerase clamp, expressed K04802: proliferating cell nuclear antigen
5 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
6 Sobic.001G266200 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.006G145600 Os4bglu16 - monolignol beta-glucoside homologue, expressed K05350: beta-glucosidase
8 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.005G135700 chalcone and stilbene synthases, putative, expressed -
11 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
12 Sobic.008G057500 Aldehyde dehydrogenase 3 H1(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
13 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.001G359100 cytochrome P450, putative, expressed -
15 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
16 Sobic.006G059400 - -
17 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
18 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
19 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
20 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic001G050300 Sobic001G050300 Sobic010G200900 Sobic010G200900 Sobic001G050300--Sobic010G200900 Sobic001G510200 Sobic001G510200 Sobic001G050300--Sobic001G510200 Sobic002G394700 Sobic002G394700 Sobic001G050300--Sobic002G394700 Sobic002G431700 Sobic002G431700 Sobic001G050300--Sobic002G431700 Sobic005G088500 Sobic005G088500 Sobic001G050300--Sobic005G088500 Sobic001G266200 Sobic001G266200 Sobic001G050300--Sobic001G266200 Sobic006G145600 Sobic006G145600 Sobic001G050300--Sobic006G145600 Sobic009G162800 Sobic009G162800 Sobic001G050300--Sobic009G162800 Sobic006G166800 Sobic006G166800 Sobic001G050300--Sobic006G166800 Sobic003G062900 Sobic003G062900 Sobic010G200900--Sobic003G062900 Sobic003G070200 Sobic003G070200 Sobic010G200900--Sobic003G070200 Sobic001G153800 Sobic001G153800 Sobic010G200900--Sobic001G153800 Sobic001G359100 Sobic001G359100 Sobic010G200900--Sobic001G359100 Sobic006G059400 Sobic006G059400 Sobic010G200900--Sobic006G059400 Sobic002G334400 Sobic002G334400 Sobic010G200900--Sobic002G334400 Sobic002G305400 Sobic002G305400 Sobic010G200900--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic010G200900--Sobic009G087900 Sobic002G260100 Sobic002G260100 Sobic010G200900--Sobic002G260100 Sobic007G027200 Sobic007G027200 Sobic001G510200--Sobic007G027200 Sobic001G510200--Sobic006G166800 Sobic001G510200--Sobic002G394700 Sobic001G221400 Sobic001G221400 Sobic001G510200--Sobic001G221400 Sobic004G167000 Sobic004G167000 Sobic001G510200--Sobic004G167000 Sobic002G039400 Sobic002G039400 Sobic001G510200--Sobic002G039400 Sobic006G125600 Sobic006G125600 Sobic001G510200--Sobic006G125600 Sobic010G108200 Sobic010G108200 Sobic001G510200--Sobic010G108200 Sobic008G008200 Sobic008G008200 Sobic001G510200--Sobic008G008200 Sobic002G394700--Sobic010G108200 Sobic002G394700--Sobic006G125600 Sobic003G071300 Sobic003G071300 Sobic002G394700--Sobic003G071300 Sobic007G095000 Sobic007G095000 Sobic002G394700--Sobic007G095000 Sobic010G124500 Sobic010G124500 Sobic002G394700--Sobic010G124500 Sobic003G071100 Sobic003G071100 Sobic002G394700--Sobic003G071100 Sobic005G135800 Sobic005G135800 Sobic002G394700--Sobic005G135800 Sobic005G135400 Sobic005G135400 Sobic002G394700--Sobic005G135400 Sobic010G108600 Sobic010G108600 Sobic002G394700--Sobic010G108600 Sobic002G431700--Sobic006G145600 Sobic002G431700--Sobic001G050300 Sobic002G431700--Sobic010G200900 Sobic003G326700 Sobic003G326700 Sobic002G431700--Sobic003G326700 Sobic004G089400 Sobic004G089400 Sobic002G431700--Sobic004G089400 Sobic002G431700--Sobic001G266200 Sobic005G006701 Sobic005G006701 Sobic002G431700--Sobic005G006701 Sobic005G125400 Sobic005G125400 Sobic002G431700--Sobic005G125400 Sobic002G431700--Sobic001G510200 Sobic005G088500--Sobic002G039400 Sobic005G135700 Sobic005G135700 Sobic005G088500--Sobic005G135700 Sobic005G088500--Sobic002G394700 Sobic006G046500 Sobic006G046500 Sobic005G088500--Sobic006G046500 Sobic005G088500--Sobic010G108200 Sobic009G109850 Sobic009G109850 Sobic005G088500--Sobic009G109850 Sobic005G088500--Sobic001G510200 Sobic005G088500--Sobic006G125600 Sobic005G088500--Sobic003G071300 Sobic001G266200--Sobic001G510200 Sobic010G231600 Sobic010G231600 Sobic001G266200--Sobic010G231600 Sobic001G266200--Sobic006G166800 Sobic001G266200--Sobic007G027200 Sobic001G538000 Sobic001G538000 Sobic001G266200--Sobic001G538000 Sobic001G266200--Sobic009G162800 Sobic001G266200--Sobic010G200900 Sobic001G266200--Sobic002G039400 Sobic010G124600 Sobic010G124600 Sobic001G266200--Sobic010G124600 Sobic006G145600--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic006G145600--Sobic010G043300 Sobic006G145600--Sobic004G089400 Sobic007G010350 Sobic007G010350 Sobic006G145600--Sobic007G010350 Sobic001G092700 Sobic001G092700 Sobic006G145600--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic006G145600--Sobic007G219300 Sobic001G355300 Sobic001G355300 Sobic006G145600--Sobic001G355300 Sobic006G145600--Sobic005G125400 Sobic003G164300 Sobic003G164300 Sobic006G145600--Sobic003G164300 Sobic009G162800--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic009G162800--Sobic003G352800 Sobic010G196400 Sobic010G196400 Sobic009G162800--Sobic010G196400 Sobic009G162800--Sobic007G027200 Sobic009G162800--Sobic001G510200 Sobic003G153400 Sobic003G153400 Sobic009G162800--Sobic003G153400 Sobic009G162800--Sobic002G394700 Sobic003G276200 Sobic003G276200 Sobic009G162800--Sobic003G276200 Sobic009G241600 Sobic009G241600 Sobic009G162800--Sobic009G241600 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic007G043800 Sobic007G043800 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600
Octagon: transcription factors


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