Gene annotation
Transcriptome id Sobic.008G057500.1
Synonym ALDH3H1, Sb08g004840, ALDH4
Functional annotation Aldehyde dehydrogenase 3 H1 (PubMedID : 26320239)
aldehyde dehydrogenase, putative, expressed
UniProt C5YST8
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF175
NCBI CDD -
KEGG Orthology K00128; aldehyde dehydrogenase (NAD+)
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G44170 : aldehyde dehydrogenase 3H1
RAP-DB (Rice) LOC_Os12g07810.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a054063
Brachypodium PNT65356 , KQJ92012 , KQJ92011
Barley -
Wheat TraesCS5A02G113200 , TraesCS5A02G113200 , TraesCS5B02G120100 , TraesCS5D02G127300 , TraesCS5D02G127300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
2 Sobic.005G006701 - -
3 Sobic.010G043300 expressed protein -
4 Sobic.004G089400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.009G180300 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.007G010350 - -
7 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
8 Sobic.007G219300 BURP domain containing protein, expressed -
9 Sobic.004G149200 ankyrin, putative, expressed -
10 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
11 Sobic.001G092650 - -
12 Sobic.005G125400 C4-dicarboxylate transporter/malic acid transport protein, expressed -
13 Sobic.001G092700 - -
14 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
15 Sobic.009G067100 cytochrome P450, putative, expressed -
16 Sobic.007G083500 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
17 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
18 Sobic.002G121100 OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
20 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G057500 Sobic008G057500 Sobic006G067300 Sobic006G067300 Sobic008G057500--Sobic006G067300 Sobic005G006701 Sobic005G006701 Sobic008G057500--Sobic005G006701 Sobic010G043300 Sobic010G043300 Sobic008G057500--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic008G057500--Sobic004G089400 Sobic009G180300 Sobic009G180300 Sobic008G057500--Sobic009G180300 Sobic007G010350 Sobic007G010350 Sobic008G057500--Sobic007G010350 Sobic003G164300 Sobic003G164300 Sobic008G057500--Sobic003G164300 Sobic007G219300 Sobic007G219300 Sobic008G057500--Sobic007G219300 Sobic004G149200 Sobic004G149200 Sobic008G057500--Sobic004G149200 Sobic006G067300--Sobic005G006701 Sobic006G067300--Sobic003G164300 Sobic006G067300--Sobic004G089400 Sobic006G067300--Sobic010G043300 Sobic006G067300--Sobic009G180300 Sobic006G067300--Sobic004G149200 Sobic006G067300--Sobic007G010350 Sobic006G067300--Sobic008G057500 Sobic001G092700 Sobic001G092700 Sobic006G067300--Sobic001G092700 Sobic005G006701--Sobic004G089400 Sobic005G006701--Sobic010G043300 Sobic005G006701--Sobic004G149200 Sobic005G006701--Sobic007G010350 Sobic005G006701--Sobic006G067300 Sobic002G260100 Sobic002G260100 Sobic005G006701--Sobic002G260100 Sobic005G006701--Sobic001G092700 Sobic003G062900 Sobic003G062900 Sobic005G006701--Sobic003G062900 Sobic005G006701--Sobic003G164300 Sobic010G043300--Sobic005G006701 Sobic010G043300--Sobic007G219300 Sobic010G043300--Sobic007G010350 Sobic001G092650 Sobic001G092650 Sobic010G043300--Sobic001G092650 Sobic003G180700 Sobic003G180700 Sobic010G043300--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic010G043300--Sobic001G355300 Sobic010G043300--Sobic001G092700 Sobic009G067100 Sobic009G067100 Sobic010G043300--Sobic009G067100 Sobic007G083500 Sobic007G083500 Sobic010G043300--Sobic007G083500 Sobic004G089400--Sobic005G006701 Sobic004G089400--Sobic004G149200 Sobic004G089400--Sobic003G062900 Sobic004G089400--Sobic010G043300 Sobic004G089400--Sobic002G260100 Sobic006G059400 Sobic006G059400 Sobic004G089400--Sobic006G059400 Sobic004G089400--Sobic006G067300 Sobic003G070200 Sobic003G070200 Sobic004G089400--Sobic003G070200 Sobic001G359100 Sobic001G359100 Sobic004G089400--Sobic001G359100 Sobic009G187700 Sobic009G187700 Sobic009G180300--Sobic009G187700 Sobic009G180300--Sobic006G067300 Sobic002G007500 Sobic002G007500 Sobic009G180300--Sobic002G007500 Sobic009G180300--Sobic004G089400 Sobic009G180300--Sobic005G006701 Sobic009G180300--Sobic003G062900 Sobic009G180300--Sobic008G057500 Sobic009G180300--Sobic002G260100 Sobic009G180300--Sobic004G149200 Sobic007G010350--Sobic010G043300 Sobic007G010350--Sobic005G006701 Sobic007G010350--Sobic003G164300 Sobic007G010350--Sobic007G219300 Sobic007G010350--Sobic001G092650 Sobic007G010350--Sobic003G180700 Sobic007G010350--Sobic001G355300 Sobic007G010350--Sobic001G092700 Sobic007G010350--Sobic009G067100 Sobic003G164300--Sobic010G043300 Sobic003G164300--Sobic007G010350 Sobic003G164300--Sobic007G219300 Sobic003G164300--Sobic006G067300 Sobic003G164300--Sobic003G180700 Sobic003G164300--Sobic001G355300 Sobic003G164300--Sobic001G092650 Sobic003G164300--Sobic009G067100 Sobic003G164300--Sobic007G083500 Sobic007G219300--Sobic003G180700 Sobic007G219300--Sobic001G355300 Sobic007G219300--Sobic009G067100 Sobic007G219300--Sobic007G083500 Sobic007G219300--Sobic001G092650 Sobic002G298500 Sobic002G298500 Sobic007G219300--Sobic002G298500 Sobic007G219300--Sobic010G043300 Sobic006G018000 Sobic006G018000 Sobic007G219300--Sobic006G018000 Sobic005G125400 Sobic005G125400 Sobic007G219300--Sobic005G125400 Sobic004G149200--Sobic004G089400 Sobic004G149200--Sobic005G006701 Sobic004G149200--Sobic010G043300 Sobic004G149200--Sobic006G067300 Sobic004G149200--Sobic007G010350 Sobic004G149200--Sobic003G062900 Sobic004G149200--Sobic002G260100 Sobic004G149200--Sobic001G092700 Sobic004G149200--Sobic006G059400
Octagon: transcription factors


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