Gene annotation
| Transcriptome id | Sobic.003G180700.3,Sobic.003G180700.1 |
|---|---|
| Synonym | ZIF1, Sb03g023750 |
| Functional annotation | major facilitator superfamily antiporter, putative, expressed |
| UniProt | A0A1B6Q401 |
| Pfam | PF07690 |
| Panther DB | PTHR23504 PTHR23504:SF25 PTHR23504:SF25 PTHR23504 |
| NCBI CDD | KOG2615; Permease of the major facilitator superfamily |
| KEGG Orthology | - |
| Gene Ontology | GO:0016021; integral component of membrane GO:0016021integral component of membrane |
Orthologs (automatic annotation)
| TAIR | AT5G13750 : zinc induced facilitator-like 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g17214.1 : major facilitator superfamily antiporter, putative, expressed |
| MaizeGDB (Corn) | Zm00025a024722 , Zm00025a024156 , Zm00025a005418 |
| Brachypodium | - |
| Barley | HORVU3Hr1G043300.10 , HORVU3Hr1G043300.22 , HORVU3Hr1G043300.23 , HORVU3Hr1G043300.20 , HORVU3Hr1G043300.21 , HORVU3Hr1G043300.15 , HORVU3Hr1G043300.14 , HORVU3Hr1G043300.12 , HORVU3Hr1G043300.11 , HORVU3Hr1G043300.18 , HORVU3Hr1G043300.9 , HORVU3Hr1G043300.8 , HORVU3Hr1G043300.7 , HORVU3Hr1G043300.6 , HORVU3Hr1G043300.5 , HORVU3Hr1G043300.4 , HORVU3Hr1G043300.3 , HORVU3Hr1G043300.2 , HORVU3Hr1G043300.17 |
| Wheat | TraesCS5B02G542800 , TraesCS5B02G542800 , TraesCS3A02G395100 , TraesCS3B02G220000 , TraesCS3B02G220000 , TraesCS3B02G220000 , TraesCS3D02G194600 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS3A02G191000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G355300 | aldose 1-epimerase, putative, expressed | K01785: galM, aldose 1-epimerase |
| 2 | Sobic.007G219300 | BURP domain containing protein, expressed | - |
| 3 | Sobic.009G067100 | cytochrome P450, putative, expressed | - |
| 4 | Sobic.007G083500 | speckle-type POZ protein, putative, expressed | K10523: speckle-type POZ protein |
| 5 | Sobic.002G298500 | LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed | - |
| 6 | Sobic.001G092650 | - | - |
| 7 | Sobic.006G018000 | expressed protein | - |
| 8 | Sobic.010G043300 | expressed protein | - |
| 9 | Sobic.005G125400 | C4-dicarboxylate transporter/malic acid transport protein, expressed | - |
| 10 | Sobic.001G092700 | - | - |
| 11 | Sobic.007G010350 | - | - |
| 12 | Sobic.006G124500 | Regulator of chromosome condensation domain containing protein, expressed | - |
| 13 | Sobic.003G164300 | cullin, putative, expressed | K03347: CUL1, cullin 1 |
| 14 | Sobic.003G354850 | - | - |
| 15 | Sobic.005G212300 | MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 16 | Sobic.002G100300 | OsFBD15 - F-box and FBD domain containing protein, expressed | - |
| 17 | Sobic.003G090200 | seven in absentia protein family domain containing protein, expressed | - |
| 18 | Sobic.002G121100 | OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed | K16296: serine carboxypeptidase-like clade I |
| 19 | Sobic.008G046300 | STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | K08867: WNK, WNK lysine deficient protein kinase |
| 20 | Sobic.002G123400 | OsRR7 type-A response regulator, expressed | K14492: two-component response regulator ARR-A family |
Gene co-expression network
Octagon: transcription factors
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