Gene annotation
Transcriptome id Sobic.007G083500.1
Synonym BPM2, ATBPM2, Sb07g006860
Functional annotation speckle-type POZ protein, putative, expressed
UniProt C5YJ20
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF154
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G06190 : BTB-POZ and MATH domain 2
RAP-DB (Rice) LOC_Os08g13250.1 : speckle-type POZ protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G067100 cytochrome P450, putative, expressed -
2 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
4 Sobic.007G219300 BURP domain containing protein, expressed -
5 Sobic.002G298500 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.001G092650 - -
7 Sobic.006G018000 expressed protein -
8 Sobic.006G124500 Regulator of chromosome condensation domain containing protein, expressed -
9 Sobic.010G043300 expressed protein -
10 Sobic.005G125400 C4-dicarboxylate transporter/malic acid transport protein, expressed -
11 Sobic.001G092700 - -
12 Sobic.003G354850 - -
13 Sobic.005G212300 MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
14 Sobic.002G100300 OsFBD15 - F-box and FBD domain containing protein, expressed -
15 Sobic.003G090200 seven in absentia protein family domain containing protein, expressed -
16 Sobic.007G010350 - -
17 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
18 Sobic.006G015700 expressed protein -
19 Sobic.002G123400 OsRR7 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
20 Sobic.002G121100 OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I


Gene co-expression network
sample Sobic007G083500 Sobic007G083500 Sobic009G067100 Sobic009G067100 Sobic007G083500--Sobic009G067100 Sobic003G180700 Sobic003G180700 Sobic007G083500--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic007G083500--Sobic001G355300 Sobic007G219300 Sobic007G219300 Sobic007G083500--Sobic007G219300 Sobic002G298500 Sobic002G298500 Sobic007G083500--Sobic002G298500 Sobic001G092650 Sobic001G092650 Sobic007G083500--Sobic001G092650 Sobic006G018000 Sobic006G018000 Sobic007G083500--Sobic006G018000 Sobic006G124500 Sobic006G124500 Sobic007G083500--Sobic006G124500 Sobic010G043300 Sobic010G043300 Sobic007G083500--Sobic010G043300 Sobic009G067100--Sobic007G083500 Sobic009G067100--Sobic003G180700 Sobic009G067100--Sobic001G355300 Sobic009G067100--Sobic007G219300 Sobic009G067100--Sobic002G298500 Sobic009G067100--Sobic001G092650 Sobic009G067100--Sobic006G018000 Sobic009G067100--Sobic010G043300 Sobic009G067100--Sobic006G124500 Sobic003G180700--Sobic001G355300 Sobic003G180700--Sobic007G219300 Sobic003G180700--Sobic009G067100 Sobic003G180700--Sobic007G083500 Sobic003G180700--Sobic002G298500 Sobic003G180700--Sobic001G092650 Sobic003G180700--Sobic006G018000 Sobic003G180700--Sobic010G043300 Sobic005G125400 Sobic005G125400 Sobic003G180700--Sobic005G125400 Sobic001G355300--Sobic003G180700 Sobic001G355300--Sobic007G219300 Sobic001G355300--Sobic009G067100 Sobic001G355300--Sobic007G083500 Sobic001G355300--Sobic002G298500 Sobic001G355300--Sobic001G092650 Sobic001G355300--Sobic006G018000 Sobic001G355300--Sobic010G043300 Sobic001G355300--Sobic005G125400 Sobic007G219300--Sobic003G180700 Sobic007G219300--Sobic001G355300 Sobic007G219300--Sobic009G067100 Sobic007G219300--Sobic007G083500 Sobic007G219300--Sobic001G092650 Sobic007G219300--Sobic002G298500 Sobic007G219300--Sobic010G043300 Sobic007G219300--Sobic006G018000 Sobic007G219300--Sobic005G125400 Sobic002G298500--Sobic006G018000 Sobic002G298500--Sobic001G355300 Sobic002G298500--Sobic003G180700 Sobic002G298500--Sobic009G067100 Sobic003G354850 Sobic003G354850 Sobic002G298500--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic002G298500--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic002G298500--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic002G298500--Sobic003G090200 Sobic002G298500--Sobic007G219300 Sobic001G092650--Sobic007G219300 Sobic001G092650--Sobic003G180700 Sobic001G092650--Sobic001G355300 Sobic001G092650--Sobic009G067100 Sobic001G092650--Sobic007G083500 Sobic001G092650--Sobic010G043300 Sobic001G092650--Sobic002G298500 Sobic001G092700 Sobic001G092700 Sobic001G092650--Sobic001G092700 Sobic007G010350 Sobic007G010350 Sobic001G092650--Sobic007G010350 Sobic006G018000--Sobic002G298500 Sobic006G018000--Sobic003G354850 Sobic006G018000--Sobic005G212300 Sobic006G018000--Sobic002G100300 Sobic006G018000--Sobic003G090200 Sobic002G123400 Sobic002G123400 Sobic006G018000--Sobic002G123400 Sobic006G018000--Sobic001G355300 Sobic006G018000--Sobic009G067100 Sobic006G018000--Sobic003G180700 Sobic006G124500--Sobic006G018000 Sobic006G124500--Sobic003G354850 Sobic006G124500--Sobic005G212300 Sobic006G124500--Sobic002G100300 Sobic006G124500--Sobic003G090200 Sobic006G124500--Sobic002G298500 Sobic006G124500--Sobic002G123400 Sobic006G124500--Sobic007G083500 Sobic006G124500--Sobic009G067100 Sobic005G006701 Sobic005G006701 Sobic010G043300--Sobic005G006701 Sobic010G043300--Sobic007G219300 Sobic010G043300--Sobic007G010350 Sobic010G043300--Sobic001G092650 Sobic010G043300--Sobic003G180700 Sobic010G043300--Sobic001G355300 Sobic010G043300--Sobic001G092700 Sobic010G043300--Sobic009G067100 Sobic010G043300--Sobic007G083500
Octagon: transcription factors


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