Gene annotation
Transcriptome id Sobic.002G121100.1
Synonym SCPL7, Sb02g010500
Functional annotation OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1B6QAQ5
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF46
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16296; serine carboxypeptidase-like clade I
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G10450 : serine carboxypeptidase-like 7
RAP-DB (Rice) LOC_Os11g24510.1 : OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a045808
Brachypodium -
Barley HORVU3Hr1G078300.5 , HORVU3Hr1G078300.4 , HORVU3Hr1G078300.7 , HORVU3Hr1G078300.6 , HORVU3Hr1G078300.1 , HORVU3Hr1G078300.3 , HORVU3Hr1G078300.2 , HORVU3Hr1G078300.9 , HORVU3Hr1G078300.8 , HORVU3Hr1G078300.11 , HORVU3Hr1G078300.10
Wheat TraesCS1B02G416700 , TraesCS1B02G416700 , TraesCS2D02G409500 , TraesCS2D02G409800 , TraesCS2D02G409800 , TraesCS2B02G430900
Populus -


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cDNA sequences
Sobic.002G121100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G219300 BURP domain containing protein, expressed -
2 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
4 Sobic.009G067100 cytochrome P450, putative, expressed -
5 Sobic.007G083500 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
6 Sobic.001G092650 - -
7 Sobic.002G298500 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
8 Sobic.010G043300 expressed protein -
9 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
10 Sobic.006G018000 expressed protein -
11 Sobic.004G022366 - -
12 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
13 Sobic.007G010350 - -
14 Sobic.005G125400 C4-dicarboxylate transporter/malic acid transport protein, expressed -
15 Sobic.001G092700 - -
16 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -
17 Sobic.006G124500 Regulator of chromosome condensation domain containing protein, expressed -
18 Sobic.003G354850 - -
19 Sobic.005G212300 MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G100300 OsFBD15 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic002G121100 Sobic002G121100 Sobic007G219300 Sobic007G219300 Sobic002G121100--Sobic007G219300 Sobic003G180700 Sobic003G180700 Sobic002G121100--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic002G121100--Sobic001G355300 Sobic009G067100 Sobic009G067100 Sobic002G121100--Sobic009G067100 Sobic007G083500 Sobic007G083500 Sobic002G121100--Sobic007G083500 Sobic001G092650 Sobic001G092650 Sobic002G121100--Sobic001G092650 Sobic002G298500 Sobic002G298500 Sobic002G121100--Sobic002G298500 Sobic010G043300 Sobic010G043300 Sobic002G121100--Sobic010G043300 Sobic010G261800 Sobic010G261800 Sobic002G121100--Sobic010G261800 Sobic007G219300--Sobic003G180700 Sobic007G219300--Sobic001G355300 Sobic007G219300--Sobic009G067100 Sobic007G219300--Sobic007G083500 Sobic007G219300--Sobic001G092650 Sobic007G219300--Sobic002G298500 Sobic007G219300--Sobic010G043300 Sobic006G018000 Sobic006G018000 Sobic007G219300--Sobic006G018000 Sobic005G125400 Sobic005G125400 Sobic007G219300--Sobic005G125400 Sobic003G180700--Sobic001G355300 Sobic003G180700--Sobic007G219300 Sobic003G180700--Sobic009G067100 Sobic003G180700--Sobic007G083500 Sobic003G180700--Sobic002G298500 Sobic003G180700--Sobic001G092650 Sobic003G180700--Sobic006G018000 Sobic003G180700--Sobic010G043300 Sobic003G180700--Sobic005G125400 Sobic001G355300--Sobic003G180700 Sobic001G355300--Sobic007G219300 Sobic001G355300--Sobic009G067100 Sobic001G355300--Sobic007G083500 Sobic001G355300--Sobic002G298500 Sobic001G355300--Sobic001G092650 Sobic001G355300--Sobic006G018000 Sobic001G355300--Sobic010G043300 Sobic001G355300--Sobic005G125400 Sobic009G067100--Sobic007G083500 Sobic009G067100--Sobic003G180700 Sobic009G067100--Sobic001G355300 Sobic009G067100--Sobic007G219300 Sobic009G067100--Sobic002G298500 Sobic009G067100--Sobic001G092650 Sobic009G067100--Sobic006G018000 Sobic009G067100--Sobic010G043300 Sobic006G124500 Sobic006G124500 Sobic009G067100--Sobic006G124500 Sobic007G083500--Sobic009G067100 Sobic007G083500--Sobic003G180700 Sobic007G083500--Sobic001G355300 Sobic007G083500--Sobic007G219300 Sobic007G083500--Sobic002G298500 Sobic007G083500--Sobic001G092650 Sobic007G083500--Sobic006G018000 Sobic007G083500--Sobic006G124500 Sobic007G083500--Sobic010G043300 Sobic001G092650--Sobic007G219300 Sobic001G092650--Sobic003G180700 Sobic001G092650--Sobic001G355300 Sobic001G092650--Sobic009G067100 Sobic001G092650--Sobic007G083500 Sobic001G092650--Sobic010G043300 Sobic001G092650--Sobic002G298500 Sobic001G092700 Sobic001G092700 Sobic001G092650--Sobic001G092700 Sobic007G010350 Sobic007G010350 Sobic001G092650--Sobic007G010350 Sobic002G298500--Sobic006G018000 Sobic002G298500--Sobic001G355300 Sobic002G298500--Sobic003G180700 Sobic002G298500--Sobic009G067100 Sobic003G354850 Sobic003G354850 Sobic002G298500--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic002G298500--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic002G298500--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic002G298500--Sobic003G090200 Sobic002G298500--Sobic007G219300 Sobic005G006701 Sobic005G006701 Sobic010G043300--Sobic005G006701 Sobic010G043300--Sobic007G219300 Sobic010G043300--Sobic007G010350 Sobic010G043300--Sobic001G092650 Sobic010G043300--Sobic003G180700 Sobic010G043300--Sobic001G355300 Sobic010G043300--Sobic001G092700 Sobic010G043300--Sobic009G067100 Sobic010G043300--Sobic007G083500 Sobic010G090000 Sobic010G090000 Sobic010G261800--Sobic010G090000 Sobic006G256400 Sobic006G256400 Sobic010G261800--Sobic006G256400 Sobic002G123400 Sobic002G123400 Sobic010G261800--Sobic002G123400 Sobic005G006900 Sobic005G006900 Sobic010G261800--Sobic005G006900 Sobic010G261800--Sobic003G090200 Sobic010G261800--Sobic002G100300 Sobic010G261800--Sobic005G212300 Sobic010G261800--Sobic003G354850 Sobic010G261800--Sobic002G121100
Octagon: transcription factors


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