Gene annotation
Transcriptome id Sobic.006G015700.1
Synonym Sb06g001520
Functional annotation expressed protein
UniProt C5YC70
Pfam PF03478
Panther DB PTHR11102 PTHR11102:SF82
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17036 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os04g08070.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G130200 , TraesCS7D02G129600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G124500 Regulator of chromosome condensation domain containing protein, expressed -
2 Sobic.007G083500 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
3 Sobic.009G067100 cytochrome P450, putative, expressed -
4 Sobic.006G018000 expressed protein -
5 Sobic.002G298500 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.002G123400 OsRR7 type-A response regulator, expressed K14492: two-component response regulator ARR-A family
7 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
8 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
9 Sobic.003G354850 - -
10 Sobic.005G212300 MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G100300 OsFBD15 - F-box and FBD domain containing protein, expressed -
12 Sobic.003G090200 seven in absentia protein family domain containing protein, expressed -
13 Sobic.007G219300 BURP domain containing protein, expressed -
14 Sobic.001G092650 - -
15 Sobic.001G502100 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
16 Sobic.008G046300 STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
17 Sobic.005G006900 RNA recognition motif containing protein, putative, expressed -
18 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.008G071700 - -
20 Sobic.008G163900 OsFBX358 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic006G015700 Sobic006G015700 Sobic006G124500 Sobic006G124500 Sobic006G015700--Sobic006G124500 Sobic007G083500 Sobic007G083500 Sobic006G015700--Sobic007G083500 Sobic009G067100 Sobic009G067100 Sobic006G015700--Sobic009G067100 Sobic006G018000 Sobic006G018000 Sobic006G015700--Sobic006G018000 Sobic002G298500 Sobic002G298500 Sobic006G015700--Sobic002G298500 Sobic002G123400 Sobic002G123400 Sobic006G015700--Sobic002G123400 Sobic003G180700 Sobic003G180700 Sobic006G015700--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic006G015700--Sobic001G355300 Sobic003G354850 Sobic003G354850 Sobic006G015700--Sobic003G354850 Sobic006G124500--Sobic006G018000 Sobic006G124500--Sobic003G354850 Sobic005G212300 Sobic005G212300 Sobic006G124500--Sobic005G212300 Sobic002G100300 Sobic002G100300 Sobic006G124500--Sobic002G100300 Sobic003G090200 Sobic003G090200 Sobic006G124500--Sobic003G090200 Sobic006G124500--Sobic002G298500 Sobic006G124500--Sobic002G123400 Sobic006G124500--Sobic007G083500 Sobic006G124500--Sobic009G067100 Sobic007G083500--Sobic009G067100 Sobic007G083500--Sobic003G180700 Sobic007G083500--Sobic001G355300 Sobic007G219300 Sobic007G219300 Sobic007G083500--Sobic007G219300 Sobic007G083500--Sobic002G298500 Sobic001G092650 Sobic001G092650 Sobic007G083500--Sobic001G092650 Sobic007G083500--Sobic006G018000 Sobic007G083500--Sobic006G124500 Sobic010G043300 Sobic010G043300 Sobic007G083500--Sobic010G043300 Sobic009G067100--Sobic007G083500 Sobic009G067100--Sobic003G180700 Sobic009G067100--Sobic001G355300 Sobic009G067100--Sobic007G219300 Sobic009G067100--Sobic002G298500 Sobic009G067100--Sobic001G092650 Sobic009G067100--Sobic006G018000 Sobic009G067100--Sobic010G043300 Sobic009G067100--Sobic006G124500 Sobic006G018000--Sobic002G298500 Sobic006G018000--Sobic003G354850 Sobic006G018000--Sobic005G212300 Sobic006G018000--Sobic002G100300 Sobic006G018000--Sobic003G090200 Sobic006G018000--Sobic002G123400 Sobic006G018000--Sobic001G355300 Sobic006G018000--Sobic009G067100 Sobic006G018000--Sobic003G180700 Sobic002G298500--Sobic006G018000 Sobic002G298500--Sobic001G355300 Sobic002G298500--Sobic003G180700 Sobic002G298500--Sobic009G067100 Sobic002G298500--Sobic003G354850 Sobic002G298500--Sobic005G212300 Sobic002G298500--Sobic002G100300 Sobic002G298500--Sobic003G090200 Sobic002G298500--Sobic007G219300 Sobic002G123400--Sobic003G090200 Sobic002G123400--Sobic002G100300 Sobic002G123400--Sobic005G212300 Sobic002G123400--Sobic003G354850 Sobic005G006900 Sobic005G006900 Sobic002G123400--Sobic005G006900 Sobic008G071700 Sobic008G071700 Sobic002G123400--Sobic008G071700 Sobic002G123400--Sobic006G018000 Sobic004G254700 Sobic004G254700 Sobic002G123400--Sobic004G254700 Sobic002G123400--Sobic002G298500 Sobic003G180700--Sobic001G355300 Sobic003G180700--Sobic007G219300 Sobic003G180700--Sobic009G067100 Sobic003G180700--Sobic007G083500 Sobic003G180700--Sobic002G298500 Sobic003G180700--Sobic001G092650 Sobic003G180700--Sobic006G018000 Sobic003G180700--Sobic010G043300 Sobic005G125400 Sobic005G125400 Sobic003G180700--Sobic005G125400 Sobic001G355300--Sobic003G180700 Sobic001G355300--Sobic007G219300 Sobic001G355300--Sobic009G067100 Sobic001G355300--Sobic007G083500 Sobic001G355300--Sobic002G298500 Sobic001G355300--Sobic001G092650 Sobic001G355300--Sobic006G018000 Sobic001G355300--Sobic010G043300 Sobic001G355300--Sobic005G125400 Sobic003G354850--Sobic005G212300 Sobic003G354850--Sobic002G100300 Sobic003G354850--Sobic003G090200 Sobic003G354850--Sobic006G018000 Sobic003G354850--Sobic002G123400 Sobic003G354850--Sobic005G006900 Sobic003G354850--Sobic008G071700 Sobic003G354850--Sobic002G298500 Sobic003G354850--Sobic004G254700
Octagon: transcription factors


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