Gene annotation
Transcriptome id Sobic.008G163900.2
Synonym Sb08g021020
Functional annotation OsFBX358 - F-box domain containing protein, expressed
UniProt A0A1Z5R802
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF130
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g36840.1 : OsFBX251 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G017500 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.002G007500 3-5 exonuclease domain-containing protein, putative, expressed -
3 Sobic.006G015700 expressed protein -
4 Sobic.009G180300 LTPL61 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
5 Sobic.010G090000 syntaxin, putative, expressed K08488: syntaxin 7
6 Sobic.010G261800 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
7 Sobic.006G067300 OsFBX103 - F-box domain containing protein, expressed -
8 Sobic.002G121100 OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
9 Sobic.003G180700 major facilitator superfamily antiporter, putative, expressed -
10 Sobic.001G359000 expressed protein -
11 Sobic.001G355300 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
12 Sobic.007G219300 BURP domain containing protein, expressed -
13 Sobic.009G067100 cytochrome P450, putative, expressed -
14 Sobic.003G164300 cullin, putative, expressed K03347: CUL1, cullin 1
15 Sobic.007G083500 speckle-type POZ protein, putative, expressed K10523: speckle-type POZ protein
16 Sobic.008G057500 Aldehyde dehydrogenase 3 H1(PubMedID : 26320239)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
17 Sobic.008G046300 STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
18 Sobic.002G298500 LTPL63 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
19 Sobic.003G102100 expressed protein -
20 Sobic.001G092650 - -


Gene co-expression network
sample Sobic008G163900 Sobic008G163900 Sobic004G017500 Sobic004G017500 Sobic008G163900--Sobic004G017500 Sobic002G007500 Sobic002G007500 Sobic008G163900--Sobic002G007500 Sobic006G015700 Sobic006G015700 Sobic008G163900--Sobic006G015700 Sobic009G180300 Sobic009G180300 Sobic008G163900--Sobic009G180300 Sobic010G090000 Sobic010G090000 Sobic008G163900--Sobic010G090000 Sobic010G261800 Sobic010G261800 Sobic008G163900--Sobic010G261800 Sobic006G067300 Sobic006G067300 Sobic008G163900--Sobic006G067300 Sobic002G121100 Sobic002G121100 Sobic008G163900--Sobic002G121100 Sobic003G180700 Sobic003G180700 Sobic008G163900--Sobic003G180700 Sobic004G017500--Sobic008G163900 Sobic004G017500--Sobic002G007500 Sobic004G017500--Sobic009G180300 Sobic001G359000 Sobic001G359000 Sobic004G017500--Sobic001G359000 Sobic004G017500--Sobic006G067300 Sobic009G168100 Sobic009G168100 Sobic004G017500--Sobic009G168100 Sobic004G218100 Sobic004G218100 Sobic004G017500--Sobic004G218100 Sobic004G017500--Sobic006G015700 Sobic008G140600 Sobic008G140600 Sobic004G017500--Sobic008G140600 Sobic002G007500--Sobic008G163900 Sobic002G007500--Sobic009G180300 Sobic002G007500--Sobic004G017500 Sobic002G007500--Sobic006G067300 Sobic002G007500--Sobic002G121100 Sobic008G057500 Sobic008G057500 Sobic002G007500--Sobic008G057500 Sobic010G043300 Sobic010G043300 Sobic002G007500--Sobic010G043300 Sobic004G089400 Sobic004G089400 Sobic002G007500--Sobic004G089400 Sobic009G187700 Sobic009G187700 Sobic002G007500--Sobic009G187700 Sobic006G124500 Sobic006G124500 Sobic006G015700--Sobic006G124500 Sobic007G083500 Sobic007G083500 Sobic006G015700--Sobic007G083500 Sobic009G067100 Sobic009G067100 Sobic006G015700--Sobic009G067100 Sobic006G018000 Sobic006G018000 Sobic006G015700--Sobic006G018000 Sobic002G298500 Sobic002G298500 Sobic006G015700--Sobic002G298500 Sobic002G123400 Sobic002G123400 Sobic006G015700--Sobic002G123400 Sobic006G015700--Sobic003G180700 Sobic001G355300 Sobic001G355300 Sobic006G015700--Sobic001G355300 Sobic003G354850 Sobic003G354850 Sobic006G015700--Sobic003G354850 Sobic009G180300--Sobic009G187700 Sobic009G180300--Sobic006G067300 Sobic009G180300--Sobic002G007500 Sobic009G180300--Sobic004G089400 Sobic005G006701 Sobic005G006701 Sobic009G180300--Sobic005G006701 Sobic003G062900 Sobic003G062900 Sobic009G180300--Sobic003G062900 Sobic009G180300--Sobic008G057500 Sobic002G260100 Sobic002G260100 Sobic009G180300--Sobic002G260100 Sobic004G149200 Sobic004G149200 Sobic009G180300--Sobic004G149200 Sobic004G256100 Sobic004G256100 Sobic010G090000--Sobic004G256100 Sobic010G090000--Sobic010G261800 Sobic001G474100 Sobic001G474100 Sobic010G090000--Sobic001G474100 Sobic007G193600 Sobic007G193600 Sobic010G090000--Sobic007G193600 Sobic003G102100 Sobic003G102100 Sobic010G090000--Sobic003G102100 Sobic001G103600 Sobic001G103600 Sobic010G090000--Sobic001G103600 Sobic001G502100 Sobic001G502100 Sobic010G090000--Sobic001G502100 Sobic003G018000 Sobic003G018000 Sobic010G090000--Sobic003G018000 Sobic010G090000--Sobic002G123400 Sobic010G261800--Sobic010G090000 Sobic006G256400 Sobic006G256400 Sobic010G261800--Sobic006G256400 Sobic010G261800--Sobic002G123400 Sobic005G006900 Sobic005G006900 Sobic010G261800--Sobic005G006900 Sobic003G090200 Sobic003G090200 Sobic010G261800--Sobic003G090200 Sobic002G100300 Sobic002G100300 Sobic010G261800--Sobic002G100300 Sobic005G212300 Sobic005G212300 Sobic010G261800--Sobic005G212300 Sobic010G261800--Sobic003G354850 Sobic010G261800--Sobic002G121100 Sobic006G067300--Sobic005G006701 Sobic003G164300 Sobic003G164300 Sobic006G067300--Sobic003G164300 Sobic006G067300--Sobic004G089400 Sobic006G067300--Sobic010G043300 Sobic006G067300--Sobic009G180300 Sobic006G067300--Sobic004G149200 Sobic007G010350 Sobic007G010350 Sobic006G067300--Sobic007G010350 Sobic006G067300--Sobic008G057500 Sobic001G092700 Sobic001G092700 Sobic006G067300--Sobic001G092700 Sobic007G219300 Sobic007G219300 Sobic002G121100--Sobic007G219300 Sobic002G121100--Sobic003G180700 Sobic002G121100--Sobic001G355300 Sobic002G121100--Sobic009G067100 Sobic002G121100--Sobic007G083500 Sobic001G092650 Sobic001G092650 Sobic002G121100--Sobic001G092650 Sobic002G121100--Sobic002G298500 Sobic002G121100--Sobic010G043300 Sobic002G121100--Sobic010G261800 Sobic003G180700--Sobic001G355300 Sobic003G180700--Sobic007G219300 Sobic003G180700--Sobic009G067100 Sobic003G180700--Sobic007G083500 Sobic003G180700--Sobic002G298500 Sobic003G180700--Sobic001G092650 Sobic003G180700--Sobic006G018000 Sobic003G180700--Sobic010G043300 Sobic005G125400 Sobic005G125400 Sobic003G180700--Sobic005G125400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.